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13_2_20cm_scaffold_6484

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6484_1
unknown

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3..71
DNA (69bp) protein (23aa)

This feature has no annotations

13_2_20cm_scaffold_6484_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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334..1557
DNA (1224bp) protein (408aa)
Transposase IS116/IS110/IS902 family protein n=4 Tax=Variovorax paradoxus RepID=C5D1Y3_VARPS
transposase IS116/IS110/IS902 family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
transposase IS116/IS110/IS902 family protein
13_2_20cm_scaffold_6484_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1826..4108)
DNA (2283bp) protein (761aa)
transketolase central region; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=GWA2_Rokubacteria_73_35_curated
Transketolase central region id=3577277 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
transketolase, central region
13_2_20cm_scaffold_6484_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4132..4836)
DNA (705bp) protein (235aa)
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) id=3577280 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
livF; branched-chain amino acid transport ATP-binding protein livF; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F)
13_2_20cm_scaffold_6484_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4829..5005)
DNA (177bp) protein (59aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3577283 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid transport ATP-binding protein LivG
13_2_20cm_scaffold_6484_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5567..5815)
DNA (249bp) protein (83aa)
Inner-membrane translocator id=3577286 bin=GWA2_Methylomirabilis_73_35 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator Tax=GWA2_Rokubacteria_73_35_curated
inner-membrane translocator
13_2_20cm_scaffold_6484_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(5815..6591)
DNA (777bp) protein (259aa)
inner-membrane translocator id=14625865 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator Tax=CSP1_6_Rokubacteria
branched chain amino acid ABC transporter
13_2_20cm_scaffold_6484_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(6588..7511)
DNA (924bp) protein (308aa)
livK1; high-affinity branched-chain amino acid ABC transporter permease id=14625864 bin=bin7_NC10_sister species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
livK1; high-affinity branched-chain amino acid ABC transporter permease Tax=CSP1_6_Rokubacteria
inner-membrane translocator
13_2_20cm_scaffold_6484_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(7524..8390)
DNA (867bp) protein (289aa)
livK3; ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
livK3; ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein id=14625863 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
vagC; virulence-like protein VagC
Displaying 9 items

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