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13_2_20cm_scaffold_8197

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_8197_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1..201)
DNA (201bp) protein (67aa)
livF1; branched-chain amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Branched-chain amino acid ABC transporter ATPase id=1829170 bin=GWA2_Methylomirabilis_73_35 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATP-binding protein
13_2_20cm_scaffold_8197_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(208..1536)
DNA (1329bp) protein (443aa)
hypothetical protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1829168 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
livK; branched-chain amino acid ABC transporter system, substrate-binding protein
13_2_20cm_scaffold_8197_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1554..2630)
DNA (1077bp) protein (359aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GWM9_9PROT
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
livM; high-affinity branched-chain amino acid transport system permease livM
13_2_20cm_scaffold_8197_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2649..3587)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036CE0C1 rbh
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
branched-chain amino acid ABC transporter permease
13_2_20cm_scaffold_8197_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3580..4365)
DNA (786bp) protein (262aa)
Branched-chain amino acid transport ATP-binding protein LivG n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HJ46_9PROT
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter
13_2_20cm_scaffold_8197_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4362..6248)
DNA (1887bp) protein (629aa)
fadD3; AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
AMP-forming long-chain acyl-CoA synthetase id=3041073 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fadD3; AMP-dependent synthetase and ligase
13_2_20cm_scaffold_8197_7
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6366..6608)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030F069A
Uncharacterized protein {ECO:0000313|EMBL:KFL27447.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
plastocyanin protein
13_2_20cm_scaffold_8197_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(6699..7655)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000374B8AB
beta-lactamase Tax=RBG_16_Chloroflexi_68_14_curated
beta-lactamase
13_2_20cm_scaffold_8197_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7663..9054)
DNA (1392bp) protein (464aa)
Xanthine/uracil/vitamin C permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease Tax=GWA2_Rokubacteria_73_35_curated
Xanthine/uracil/vitamin C permease id=3880334 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
MFS transporter
13_2_20cm_scaffold_8197_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9051..9851)
DNA (801bp) protein (267aa)
naphthoate synthase; K01661 naphthoate synthase [EC:4.1.3.36] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Naphthoate synthase id=3880344 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
naphthoate synthase
Displaying 10 items

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