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13_2_20cm_scaffold_831

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_831_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..620)
DNA (618bp) protein (206aa)
nitrate reductase (EC:1.7.99.4)
Nitrate reductase n=2 Tax=Chloroflexus RepID=A9WIA3_CHLAA
formate dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_831_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(659..2185)
DNA (1527bp) protein (509aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B5_THERP rbh
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4Fe-4S ferredoxin
13_2_20cm_scaffold_831_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2202..2987)
DNA (786bp) protein (262aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3662434 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_2_20cm_scaffold_831_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3019..3621)
DNA (603bp) protein (201aa)
cytochrome c class I Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cytochrome c id=3662435 bin=GWA2_Methylomirabilis_73_35 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c, class I
13_2_20cm_scaffold_831_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3642..4916)
DNA (1275bp) protein (425aa)
soxF; sulfide dehydrogenase (flavocytochrome), flavoprotein subunit id=14625587 bin=bin7_NC10_sister species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
soxF; sulfide dehydrogenase (flavocytochrome), flavoprotein subunit Tax=CSP1_6_Rokubacteria
soxF; flavocytochrome c sulfide dehydrogenase protein
13_2_20cm_scaffold_831_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4957..6123)
DNA (1167bp) protein (389aa)
hypothetical protein; K07112 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3662437 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_2_20cm_scaffold_831_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6134..6310)
DNA (177bp) protein (59aa)
putative sulfur-carrier protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SirA family protein id=3284434 bin=GWC2_Methylomirabilis_70_24 species=Acidianus hospitalis genus=Acidianus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_831_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(6307..7023)
DNA (717bp) protein (239aa)
Metallo-beta-lactamase family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4X0_THERP
metallo-beta-lactamase family protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27
13_2_20cm_scaffold_831_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7016..7612)
DNA (597bp) protein (199aa)
Beta-lactamase domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFU2_DESAR
beta-lactamase Tax=RBG_16_Anaeromyxobacter_69_14_curated
beta-lactamase domain-containing protein
13_2_20cm_scaffold_831_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7639..9723)
DNA (2085bp) protein (695aa)
translation elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
translation elongation factor G
13_2_20cm_scaffold_831_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9781..11016)
DNA (1236bp) protein (412aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
threonine synthase
13_2_20cm_scaffold_831_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11037..11195)
DNA (159bp) protein (53aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_scaffold_831_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11534..12526)
DNA (993bp) protein (331aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) Tax=GWA2_Rokubacteria_73_35_curated
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=3662441 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_831_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12540..13145)
DNA (606bp) protein (202aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14625615 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_831_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13142..14155)
DNA (1014bp) protein (338aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) id=14625616 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14)
13_2_20cm_scaffold_831_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14164..15171)
DNA (1008bp) protein (336aa)
alcohol dehydrogenase (EC:1.1.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alcohol dehydrogenase (EC:1.1.1.1) id=14625617 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
alcohol dehydrogenase (EC:1.1.1.1)
13_2_20cm_scaffold_831_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15215..16096)
DNA (882bp) protein (294aa)
squalene/phytoene synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
squalene/phytoene synthase id=14625618 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
squalene/phytoene synthase
13_2_20cm_scaffold_831_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16093..17088)
DNA (996bp) protein (332aa)
hopanoid-associated sugar epimerase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hopanoid-associated sugar epimerase id=4350132 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hopanoid-associated sugar epimerase
13_2_20cm_scaffold_831_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17085..17759)
DNA (675bp) protein (225aa)
nucleoside phosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2224624 bin=GWA2_Methylomirabilis_73_35 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nucleoside phosphorylase
13_2_20cm_scaffold_831_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(17756..18106)
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Radical SAM domain protein id=2224623 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_831_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18114..19136)
DNA (1023bp) protein (341aa)
radical SAM protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Fe-S protein, radical SAM family id=3818235 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM protein
13_2_20cm_scaffold_831_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(19133..19933)
DNA (801bp) protein (267aa)
hypothetical protein; K08977 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Membrane protein-like protein id=2224622 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_831_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19962..21881
DNA (1920bp) protein (640aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase id=2224621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_831_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

21878..22672
DNA (795bp) protein (265aa)
toluene tolerance protein Ttg2B; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
yrbE; toluene ABC transporter subunit membrane protein id=14625626 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
toluene tolerance protein Ttg2B
13_2_20cm_scaffold_831_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

23099..23419
DNA (321bp) protein (107aa)
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative ABC transporter (ATP-binding protein) id=3917310 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
13_2_20cm_scaffold_831_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23419..23859
DNA (441bp) protein (147aa)
Mce-related protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Mce-related protein id=14625628 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mce-related protein
13_2_20cm_scaffold_831_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

23870..24508
DNA (639bp) protein (213aa)
Uncharacterized protein id=2224572 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_831_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24656..25729
DNA (1074bp) protein (358aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Myo-inositol-1-phosphate synthase id=4350048 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
myo-inositol-1-phosphate synthase
13_2_20cm_scaffold_831_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25778..28474
DNA (2697bp) protein (899aa)
Protein export membrane protein, SecD/SecF family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2216071 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Protein export membrane protein, SecD/SecF family
13_2_20cm_scaffold_831_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

28635..28895
DNA (261bp) protein (87aa)
hypothetical protein SpalD1_18615 id=2799857 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Displaying 30 items

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