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13_2_20cm_scaffold_3348

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3348_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3..1328)
DNA (1326bp) protein (442aa)
Amino acid permease n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X2_9BACT rbh
yeeF; amino acid permease
Amino acid permease {ECO:0000313|EMBL:CBK40031.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_scaffold_3348_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1440..2171)
DNA (732bp) protein (244aa)
putative gamma-glutamyl-gamma-aminobutyrate hydrolase (EC:3.5.1.94); K07010 putative glutamine amidotransferase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative gamma-glutamyl-gamma-aminobutyrate hydrolase (EC:3.5.1.94)
Putative Gamma-glutamyl-gamma-aminobutyrate hydrolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X3_9BACT rbh
13_2_20cm_scaffold_3348_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2168..2626)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_scaffold_3348_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2779..3228)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_scaffold_3348_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3343..4563
DNA (1221bp) protein (407aa)
Peptidase M24 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X6_9BACT rbh
peptidase M24 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidase M24
13_2_20cm_scaffold_3348_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4792..5613
DNA (822bp) protein (274aa)
Twin arginine-targeting protein translocase, TatA/E family (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X7_9BACT rbh
twin arginine-targeting protein translocase, tatA/E family Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
twin arginine-targeting protein translocase, tatA/E family
13_2_20cm_scaffold_3348_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5606..6400
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B131
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_2_20cm_scaffold_3348_8
unknown

Not on your lists

6454..6621
DNA (168bp) protein (56aa)

This feature has no annotations

13_2_20cm_scaffold_3348_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6730..7980)
DNA (1251bp) protein (417aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y2_9BACT rbh
clpX; ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitros
13_2_20cm_scaffold_3348_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8101..8748)
DNA (648bp) protein (216aa)
clpP; ATP-dependent Clp protease proteolytic subunit clpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
clpP; ATP-dependent Clp protease proteolytic subunit clpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y3_9BACT rbh
13_2_20cm_scaffold_3348_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8871..10196)
DNA (1326bp) protein (442aa)
Trigger factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y4_9BACT rbh
tig; trigger factor (tF); K03545 trigger factor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tig; trigger factor (tF)
13_2_20cm_scaffold_3348_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10742..11821
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y5_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40044.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_scaffold_3348_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

12014..13165
DNA (1152bp) protein (384aa)
Putative Leu/Ile/Val-binding protein, periplasmic-binding component of ABC transport system n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y6_9BACT
putative ABC transporter Leu/Ile/Val-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative ABC transporter Leu/Ile/Val-binding protein
13_2_20cm_scaffold_3348_14
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(13244..14197)
DNA (954bp) protein (318aa)
Putative Outer membrane protein, OmpA/MotB family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y8_9BACT
putative OmpA/MotB family outer membrane protein; K02557 chemotaxis protein MotB Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
peptidoglycan-binding lipoprotein, OmpA family
13_2_20cm_scaffold_3348_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15239..17089
DNA (1851bp) protein (617aa)
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III, gamma and tau subunits {ECO:0000313|EMBL:CBK40058.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK40058.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrosp
DNA polymerase III, gamma and tau subunits n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Z9_9BACT rbh
13_2_20cm_scaffold_3348_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17086..17412
DNA (327bp) protein (109aa)
Nucleoid-associated protein ybaB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA00_9BACT
ybaB; hypothetical protein
Nucleoid-associated protein ybaB {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_scaffold_3348_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17485..18087
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA01_9BACT rbh
recR; recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatu
13_2_20cm_scaffold_3348_18
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

18180..18590
DNA (411bp) protein (137aa)
Putative RNA polymerase-binding protein DksA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA02_9BACT
putative RNA polymerase-binding protein DksA; K06204 DnaK suppressor protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative RNA polymerase-binding protein DksA
13_2_20cm_scaffold_3348_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18618..18794)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA03_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
Displaying 19 items

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