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13_2_20cm_scaffold_8756

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_8756_1
unknown

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1..411
DNA (411bp) protein (137aa)

This feature has no annotations

13_2_20cm_scaffold_8756_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(412..1404)
DNA (993bp) protein (331aa)
Peptide ABC transporter ATP-binding protein n=7 Tax=Bradyrhizobium RepID=Q89UQ4_BRAJA id=5224082 bin=16ft_combo_ws3_JS1 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_16_RIF_WS3X_71_46_curated
putative peptide ABC transporter ATP-binding protein
13_2_20cm_scaffold_8756_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1401..2429)
DNA (1029bp) protein (343aa)
oligopeptide/dipeptide ABC transporter, ATPase subunit
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90217.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oligopeptide/dipeptide ABC transporter ATPase id=24464123 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_2_20cm_scaffold_8756_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2426..3352)
DNA (927bp) protein (309aa)
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90218.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Oligopeptide transport system permease protein id=1835592 bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
13_2_20cm_scaffold_8756_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3349..4329)
DNA (981bp) protein (327aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QM26_CHLP8
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
binding-protein-dependent transport systems inner membrane component
13_2_20cm_scaffold_8756_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4330..5874)
DNA (1545bp) protein (515aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E3_GEMAT
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, periplasmic subunit
13_2_20cm_scaffold_8756_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5977..6324)
DNA (348bp) protein (116aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Gemmatimonadetes_66_8_curated
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=24486945 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
biotin/lipoate A/B protein ligase
Displaying 7 items

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