ggKbase home page

13_2_20cm_scaffold_1181

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1181_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2..142
DNA (141bp) protein (47aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
13_2_20cm_scaffold_1181_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

146..568
DNA (423bp) protein (141aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Two-component hybrid sensor and regulator id=2811822 bin=GWC2_Methylomirabilis_70_24 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_1181_3
unknown

Not on your lists

657..755
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_scaffold_1181_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

827..1729
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E0E19 rbh
hypothetical protein
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=1254432 species="Bacteria; Proteobacteria;
13_2_20cm_scaffold_1181_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1726..2460
DNA (735bp) protein (245aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinolin
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000374A36D rbh
hypothetical protein
13_2_20cm_scaffold_1181_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2460..2738
DNA (279bp) protein (93aa)
coenzyme PQQ biosynthesis protein D n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346D9D9
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1254432 species="Bacteria; Proteobacteria;
13_2_20cm_scaffold_1181_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2735..3628
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YFB4_SORCE
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1254432 species="Bacteria; Proteobacteria;
13_2_20cm_scaffold_1181_8
unknown

Not on your lists

3870..3965
DNA (96bp) protein (32aa)

This feature has no annotations

13_2_20cm_scaffold_1181_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4056..5837
DNA (1782bp) protein (594aa)
Methanol dehydrogenase subunit 1 n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWM0_9PROT
Methanol dehydrogenase subunit 1 {ECO:0000313|EMBL:EGY02344.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nit
PQQ-dependent dehydrogenase
13_2_20cm_scaffold_1181_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

5943..6797
DNA (855bp) protein (285aa)
hypothetical protein id=14429050 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_2_20cm_scaffold_1181_11
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6821..7291
DNA (471bp) protein (157aa)
Cytochrome c class I n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XA46_METSD
class I cytochrome c
Cytochrome c class I {ECO:0000313|EMBL:ACT51587.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Me
13_2_20cm_scaffold_1181_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7291..8046
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI0003635BA7
hypothetical protein
Pentapeptide repeat protein {ECO:0000313|EMBL:CCE25299.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylom
13_2_20cm_scaffold_1181_13
unknown

Not on your lists

8193..8486
DNA (294bp) protein (98aa)

This feature has no annotations

13_2_20cm_scaffold_1181_14
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8510..8848)
DNA (339bp) protein (113aa)
Soluble cytochrome f n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YQW3_9PROT
Soluble cytochrome f {ECO:0000313|EMBL:ESS14057.1}; Flags: Precursor;; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
13_2_20cm_scaffold_1181_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

9210..10094
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGT4_9BACT
Protein tonB2
Uncharacterized protein {ECO:0000313|EMBL:CBE68965.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_scaffold_1181_16
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10261..12021
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00036B33BF
Alcohol dehydrogenase {ECO:0000313|EMBL:EWY40770.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibi
alcohol dehydrogenase
13_2_20cm_scaffold_1181_17
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12018..13034
DNA (1017bp) protein (339aa)
Mox cytochrome c like protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YN76_BRASO
Mox/cytochrome c like protein
Mox cytochrome c like protein {ECO:0000313|EMBL:CAL75352.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
13_2_20cm_scaffold_1181_18
unknown

Not on your lists

13148..13246
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_scaffold_1181_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13320..13847
DNA (528bp) protein (176aa)
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_2_20cm_scaffold_1181_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(13860..14048)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Methylophilus RepID=UPI00036BE06D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67242.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_scaffold_1181_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14000..14773)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI92_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67242.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_scaffold_1181_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14860..15978)
DNA (1119bp) protein (373aa)
Uncharacterized protein id=4217956 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_scaffold_1181_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16006..17358)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R31_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92297.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 23 items

View Taxonomy