name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_2_20cm_scaffold_177_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
1..402
|
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) id=14625411 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
|
|
13_2_20cm_scaffold_177_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
482..949
|
Ribosome maturation factor RimP id=1723420 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
|
|
13_2_20cm_scaffold_177_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
962..2263
|
NusA antitermination factor id=1723421 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NusA antitermination factor; K02600 N utilization substance protein A Tax=GWA2_Rokubacteria_73_35_curated
transcription termination factor NusA
|
|
13_2_20cm_scaffold_177_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
2522..3376
|
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Translation initiation factor IF-2 id=1723423 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infB; translation initiation factor IF-2
|
|
13_2_20cm_scaffold_177_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
3330..5045
|
infB; translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Translation initiation factor IF-2 id=1723423 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation factor IF-2
|
|
13_2_20cm_scaffold_177_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
5099..5311
|
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=1723424 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_2_20cm_scaffold_177_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
5311..5658
|
rbfA; putative ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Ribosome-binding factor A id=1723425 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbfA; ribosome-binding factor A
|
|
13_2_20cm_scaffold_177_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
5702..6601
|
exopolyphosphatase-related proteins; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Exopolyphosphatase-like enzyme id=1723426 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
exopolyphosphatase-related proteins
|
|
13_2_20cm_scaffold_177_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
6598..7515
|
tRNA pseudouridine synthase b; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWA2_Rokubacteria_73_35_curated
tRNA pseudouridine synthase B id=1723427 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA pseudouridine synthase B
|
|
13_2_20cm_scaffold_177_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
7478..8404
|
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=GWA2_Rokubacteria_73_35_curated
Riboflavin biosynthesis protein RibF id=1723429 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
riboflavin biosynthesis protein RibF
|
|
13_2_20cm_scaffold_177_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
8521..8790
|
30S ribosomal protein S15 id=1723473 bin=GWA2_Methylomirabilis_73_35 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpsO; 30S ribosomal protein S15
|
|
13_2_20cm_scaffold_177_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
8915..11059
|
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) id=14625422 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8)
|
|
13_2_20cm_scaffold_177_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
11052..12317
|
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ymxG; hypothetical protein id=14625423 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ymxG; hypothetical protein
|
|
13_2_20cm_scaffold_177_14
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12226..12732)
|
Putative metal-dependent hydrolase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QF79_9FIRM
Cyclase {ECO:0000313|EMBL:EWT06681.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
cyclase family protein
|
|
13_2_20cm_scaffold_177_15
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13179..13841)
|
GntR family transcriptional regulator n=1 Tax=Thermus islandicus RepID=UPI0003B520FA
Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:KFB78395.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Acc
GntR family transcriptional regulator
|
|
13_2_20cm_scaffold_177_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14021..14815
|
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QES4_9BRAD
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC48752.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
short-chain dehydrogenase/reductase SDR
|
|
13_2_20cm_scaffold_177_17
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14889..16163
|
Extracellular ligand-binding receptor n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QIA8_DESB2
rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
extracellular ligand-binding receptor
|
|
13_2_20cm_scaffold_177_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16176..16811
|
Uncharacterized protein ycgI n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FDJ9_9ALTE
hypothetical protein; K09967 hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
protein of unknown function DUF1989-containing protein
|
|
13_2_20cm_scaffold_177_19
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16821..17699
|
Inner-membrane translocator n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QIA7_DESB2
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
inner-membrane translocator
|
|
13_2_20cm_scaffold_177_20
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17701..18630
|
ABC-type transport system permease protein (Probable substrate branched-chain/neutral amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ILZ2_NATPD
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
abc06p2; branched-chain/neutral amino acids ABC transporter permease
|
|
13_2_20cm_scaffold_177_21
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18651..19349
|
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
ABC-type branched-chain amino acid transport system, ATPase component id=3434015 bin=GWF2_Methylomirabilis_70_14 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
|
|
13_2_20cm_scaffold_177_22
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19342..20064
|
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
ABC transporter ATP-binding protein id=1703882 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LivF; ABC-type branched-chain amino acid transport systems, ATPase component
|
|
13_2_20cm_scaffold_177_23
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20077..21048
|
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX69_9BURK
hypothetical protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
hypothetical protein
|
|
13_2_20cm_scaffold_177_24
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21045..21494
|
Tripartite tricarboxylate transporter TctB family Tax=RBG_13_Deltaproteobacteria_52_11b_curated
Putative uncharacterized protein id=4827672 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces bingchenggensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tripartite tricarboxylate transporter TctB family
|
|
13_2_20cm_scaffold_177_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
21500..23014
|
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Tricarboxylate transport membrane protein id=3932087 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
|
|
13_2_20cm_scaffold_177_26
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23027..24433
|
UbiD family decarboxylase n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037380F6
UbiD family decarboxylase Tax=RBG_16_Deltaproteobacteria_48_10_curated
UbiD family decarboxylase
|
|
13_2_20cm_scaffold_177_27
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria
|
Not on your lists |
24438..25316
|
carbon monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=CSP1_3_Armatimonadetes
Molybdopterin dehydrogenase FAD-binding protein id=2145514 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rbh
molybdopterin dehydrogenase FAD-binding protein
|
|
13_2_20cm_scaffold_177_28
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25313..25804
|
Aldehyde oxidase small subunit n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYN1_THERP
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ETW96851.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
aldehyde oxidase small subunit
|
|
13_2_20cm_scaffold_177_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25801..26790
|
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
13_2_20cm_scaffold_177_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26790..27524
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXE8_9RHIZ
ABC transporter inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ABC transporter inner membrane protein
|