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13_2_20cm_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 69 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_26_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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542..1663
DNA (1122bp) protein (374aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RBG_13_Bathyarchaeota_38_9_curated
putative aminotransferase
13_2_20cm_scaffold_26_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1730..2056
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B992_METTP
hypothetical protein; K09143 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_2_20cm_scaffold_26_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2053..2394)
DNA (342bp) protein (114aa)
30S ribosomal protein S25e n=3 Tax=Sulfolobus acidocaldarius RepID=M1IBE2_9CREN
30S ribosomal protein S25 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S25e
13_2_20cm_scaffold_26_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(2676..3452)
DNA (777bp) protein (259aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Thaumarchaeota_49_8_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037C0072
13_2_20cm_scaffold_26_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3449..4579)
DNA (1131bp) protein (377aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Bathyarchaeota_38_9_curated
ino; myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5T3_KORCO
13_2_20cm_scaffold_26_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(4579..5763)
DNA (1185bp) protein (395aa)
Carboxypeptidase n=2 Tax=Thermoplasma volcanium RepID=Q97AQ8_THEVO rbh
metal-dependent carboxypeptidase Tax=RBG_16_Archaea_50_20_curated
metal-dependent carboxypeptidase
13_2_20cm_scaffold_26_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5830..6579)
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5X6_9CHLR
F420-dependent oxidoreductase
13_2_20cm_scaffold_26_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6584..9187)
DNA (2604bp) protein (868aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
13_2_20cm_scaffold_26_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

9316..10743
DNA (1428bp) protein (476aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
16S rRNA methyltransferase n=1 Tax=Geobacillus sp. JF8 RepID=S5Z3B5_9BACI
16S rRNA methyltransferase
13_2_20cm_scaffold_26_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10751..11362)
DNA (612bp) protein (204aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_2_20cm_scaffold_26_11
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(11772..12086)
DNA (315bp) protein (105aa)
Rieske (2Fe-2S) domain-containing protein; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=RBG_16_Chloroflexi_64_32_curated
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=14430160 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
iron-sulfur protein
13_2_20cm_scaffold_26_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12227..12742
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PX8_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33696.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
13_2_20cm_scaffold_26_13
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12812..13246)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFJ5_METPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL16043.1}; Flags: Precursor;; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" sour
13_2_20cm_scaffold_26_14
unknown

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13995..15644
DNA (1650bp) protein (550aa)

This feature has no annotations

13_2_20cm_scaffold_26_15
unknown

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15838..16233
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_scaffold_26_16

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16248..17132
DNA (885bp) protein (295aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=mine drainage metagenome RepID=T0ZPH6_9ZZZZ
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EQD46427.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PEP phosphonomutase-like protein
13_2_20cm_scaffold_26_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17129..17482)
DNA (354bp) protein (118aa)
Putative nickel-responsive regulator 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBN4_NITGG
nickel-responsive regulator 1
Putative nickel-responsive regulator 1 {ECO:0000313|EMBL:AFU56980.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_2_20cm_scaffold_26_18
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17867..18691
DNA (825bp) protein (275aa)
Periplasmic solute binding protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H6_METB6
periplasmic solute binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ABS55687.1}; Flags: Precursor;; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula
13_2_20cm_scaffold_26_19
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18863..19486
DNA (624bp) protein (208aa)
ABC transporter related n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H5_METB6
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABS55686.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boon
13_2_20cm_scaffold_26_20
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19488..20357
DNA (870bp) protein (290aa)
ABC-3 protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H4_METB6 rbh
ABC-3 protein
ABC-3 protein {ECO:0000313|EMBL:ABS55685.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain
13_2_20cm_scaffold_26_21
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

20424..20831
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WBD6_9ACTO
hypothetical protein Tax=RBG_16_Zixibacteria_53_22_curated
Glyoxalase-like domain protein
13_2_20cm_scaffold_26_22
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20944..21681
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XND7_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EON20786.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.
hypothetical protein
13_2_20cm_scaffold_26_23
unknown

Not on your lists

comp(21779..21991)
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_scaffold_26_24
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22103..23350)
DNA (1248bp) protein (416aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; Short=BPG-independent PGAM 1;; Short=Phosphoglyceromutase 1;; Short=aPGAM 1;; EC=5.4.2.12;; TaxID=187420 species="Archaea; Euryarchaeota;
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=APGM1_METTH
13_2_20cm_scaffold_26_25
unknown

Not on your lists

comp(23679..23900)
DNA (222bp) protein (74aa)

This feature has no annotations

13_2_20cm_scaffold_26_26
GWB1_OD1_36_5, Parcubacteria, Bacteria

Not on your lists

comp(23992..24966)
DNA (975bp) protein (325aa)
dolichyl-diphosphooligosaccharide--protein glycotransferase (EC:2.4.1.119)
Dolichyl-diphosphooligosaccharide--protein glycotransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFD7_NITGG
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:KKQ07472.1}; TaxID=1618862 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_36_5.;"
13_2_20cm_scaffold_26_27
unknown

Not on your lists

25306..25605
DNA (300bp) protein (100aa)

This feature has no annotations

13_2_20cm_scaffold_26_28
RBG_16_Archaea_50_20_curated, Archaea

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25605..29279
DNA (3675bp) protein (1225aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_16_Archaea_50_20_curated
DNA topoisomerase 1 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TOP1_PYRHO
DNA topoisomerase I
13_2_20cm_scaffold_26_29
unknown

Not on your lists

comp(29244..29678)
DNA (435bp) protein (145aa)

This feature has no annotations

13_2_20cm_scaffold_26_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

29738..30631
DNA (894bp) protein (298aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RBG_13_Bathyarchaeota_38_9_curated
agmatinase (EC:3.5.3.11)
Agmatinase (Agmatine ureohydrolase) n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BIW8_HYPBU
Displaying items 1-30 of 69 in total

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