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13_2_20cm_scaffold_370

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_370_1
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2..445
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZT54_OPITP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
hypothetical protein
13_2_20cm_scaffold_370_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(488..2431)
DNA (1944bp) protein (648aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase id=4667512 bin=GWF2_Methylomirabilis_70_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase
13_2_20cm_scaffold_370_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2470..3738)
DNA (1269bp) protein (423aa)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycosyl transferase, family 2 id=5032667 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
glycosyl transferase
13_2_20cm_scaffold_370_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3776..4966)
DNA (1191bp) protein (397aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] Tax=GWA2_Rokubacteria_73_35_curated
Glycosyl transferase group 1 id=5032668 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_2_20cm_scaffold_370_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4963..5628)
DNA (666bp) protein (222aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=5032669 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytoplasmic protein
13_2_20cm_scaffold_370_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5628..6866)
DNA (1239bp) protein (413aa)
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] Tax=GWA2_Rokubacteria_73_35_curated
Maltooligosyl trehalose synthase id=5032670 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
maltooligosyl trehalose synthase
13_2_20cm_scaffold_370_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6866..8434)
DNA (1569bp) protein (523aa)
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] id=24548386 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
maltooligosyl trehalose synthase; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] Tax=RBG_16_RIF_WS3X_71_46_curated
bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase
13_2_20cm_scaffold_370_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8431..10473)
DNA (2043bp) protein (681aa)
glycoside hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Glycoside hydrolase family 57 id=3927642 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycoside hydrolase family protein
13_2_20cm_scaffold_370_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10753..11967)
DNA (1215bp) protein (405aa)
ADP-glucose pyrophosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glucose-1-phosphate adenylyltransferase id=3927644 bin=GWA2_Methylomirabilis_73_35 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glgC; glucose-1-phosphate adenylyltransferase
13_2_20cm_scaffold_370_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12002..13690)
DNA (1689bp) protein (563aa)
putative alpha-amylase (EC:3.2.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative alpha-amylase (EC:3.2.1.1)
Glycoside hydrolase family 57 id=3927648 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_370_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13725..15527
DNA (1803bp) protein (601aa)
malto-oligosyltrehalose trehalohydrolase; K01236 maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase id=3927649 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_370_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15538..16503
DNA (966bp) protein (322aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Aspartate/glutamate/hydantoin racemase (Fragment) id=3927650 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_370_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16514..17833
DNA (1320bp) protein (440aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) id=4189569 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_370_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17830..18240
DNA (411bp) protein (137aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4189570 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_370_15
unknown

Not on your lists

18445..18912
DNA (468bp) protein (156aa)

This feature has no annotations

13_2_20cm_scaffold_370_16
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

19141..20277
DNA (1137bp) protein (379aa)
chromosome partitioning ATPase; K03496 chromosome partitioning protein Tax=RBG_16_Nitrospirae_43_11_curated
Cobyrinic acid ac-diamide synthase id=4390401 bin=GWC2_OP3_44_8 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
parA; partitioning or sporulation protein ParA
13_2_20cm_scaffold_370_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20346..20993
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
13_2_20cm_scaffold_370_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

21439..25854
DNA (4416bp) protein (1472aa)
DNA helicase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8K3_9CHLR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_2_20cm_scaffold_370_19
unknown

Not on your lists

comp(25864..26373)
DNA (510bp) protein (170aa)

This feature has no annotations

13_2_20cm_scaffold_370_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

26695..27045
DNA (351bp) protein (117aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Thermincola potens (strain JR) RepID=D5X7W8_THEPJ
TraR/DksA family transcriptional regulator
dksA; DnaK suppressor protein; K06204 DnaK suppressor protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_2_20cm_scaffold_370_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(27066..27320)
DNA (255bp) protein (85aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative uncharacterized protein id=4847558 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_370_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

27487..28479
DNA (993bp) protein (331aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14626841 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_2_20cm_scaffold_370_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(28489..28917)
DNA (429bp) protein (143aa)
hypothetical protein id=5032665 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_370_24
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28987..29373)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034B878D
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:EGK83486.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleu
multi-sensor hybrid histidine kinase
13_2_20cm_scaffold_370_25
unknown

Not on your lists

comp(29403..29678)
DNA (276bp) protein (92aa)

This feature has no annotations

13_2_20cm_scaffold_370_26
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29678..30436)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUD4_GEOS8
hypothetical protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
hypothetical protein
13_2_20cm_scaffold_370_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

30673..31008
DNA (336bp) protein (112aa)
Response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U5A7_MYXSD
response regulator
response regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_2_20cm_scaffold_370_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

31005..32378
DNA (1374bp) protein (458aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036C7B55
response regulator in two-component regulatory system, sigma 54-dependent Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
response regulator in two-component regulatory system, sigma 54-dependent
13_2_20cm_scaffold_370_29
unknown

Not on your lists

32378..33058
DNA (681bp) protein (227aa)

This feature has no annotations

13_2_20cm_scaffold_370_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

33255..33701
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627436 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying items 1-30 of 40 in total

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