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13_2_20cm_scaffold_47409

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_47409_1
unknown

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2..148
DNA (147bp) protein (49aa)

This feature has no annotations

13_2_20cm_scaffold_47409_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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130..1578
DNA (1449bp) protein (483aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF id=5224911 bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
MoaD family protein {ECO:0000313|EMBL:CDM66173.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
molybdopterin and thiamine biosynthesis family dinucleotide-utilizing protein
13_2_20cm_scaffold_47409_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1837..2214
DNA (378bp) protein (126aa)
SsrA-binding protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=SSRP_DESAP
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_47409_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2214..3422
DNA (1209bp) protein (403aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J7_GEMAT
13_2_20cm_scaffold_47409_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3419..4258
DNA (840bp) protein (280aa)
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dihydroorotate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J6_GEMAT
Dihydroorotate dehydrogenase
13_2_20cm_scaffold_47409_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4251..4631
DNA (381bp) protein (127aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23) Tax=RBG_16_Gemmatimonadetes_66_8_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZG60_TERRK
13_2_20cm_scaffold_47409_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4651..4962
DNA (312bp) protein (104aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23) Tax=RBG_16_Gemmatimonadetes_66_8_curated
pyrF; Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJP1_9BACT
13_2_20cm_scaffold_47409_8
unknown

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4959..5168
DNA (210bp) protein (70aa)

This feature has no annotations

13_2_20cm_scaffold_47409_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5514..5897
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=2 Tax=Thermaerobacter RepID=E6SKX5_THEM7
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribosomal protein S13
13_2_20cm_scaffold_47409_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5898..6863
DNA (966bp) protein (322aa)
30S ribosomal protein S4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J1_GEMAT
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Gemmatimonadetes_66_8_curated
ribosomal protein S4
13_2_20cm_scaffold_47409_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6863..7420
DNA (558bp) protein (186aa)
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT
DNA-directed RNA polymerase subunit alpha
13_2_20cm_scaffold_47409_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7369..8172
DNA (804bp) protein (268aa)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA-directed RNA polymerase subunit alpha
13_2_20cm_scaffold_47409_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8228..8419)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RL28_GEODF
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpmB; 50S ribosomal protein L28
13_2_20cm_scaffold_47409_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8439..8765
DNA (327bp) protein (109aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RBG_16_Gemmatimonadetes_66_8_curated
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I7_GEMAT
Displaying 14 items

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