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13_2_20cm_scaffold_567

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_567_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

3..320
DNA (318bp) protein (106aa)
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_2_20cm_scaffold_567_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

347..1273
DNA (927bp) protein (309aa)
Anti-sigma-factor antagonist id=4927121 bin=GWA2_Ignavibacteria_55_11 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anti-sigma-factor antagonist
13_2_20cm_scaffold_567_3
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1301..1699
DNA (399bp) protein (133aa)
Antagonist protein RsbS id=4337252 bin=GWC2_Ignavibacteria_56_12 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
rsbS; sigma activity regulator
13_2_20cm_scaffold_567_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1692..2099
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003707C03
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:KCZ71458.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae;
ATPase domain-containing protein
13_2_20cm_scaffold_567_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

2114..2686
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003683974
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
protein serine/threonine phosphatase
13_2_20cm_scaffold_567_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2754..4040
DNA (1287bp) protein (429aa)
Putative multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB83_GEMAT
putative multidrug resistance protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
MATE efflux family protein
13_2_20cm_scaffold_567_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4041..4781
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB82_GEMAT
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_567_8
unknown

Not on your lists

comp(4778..5020)
DNA (243bp) protein (81aa)

This feature has no annotations

13_2_20cm_scaffold_567_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5055..5546)
DNA (492bp) protein (164aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase ECF-type sigma factor
13_2_20cm_scaffold_567_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5639..6097
DNA (459bp) protein (153aa)
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimon
Demethylmenaquinone methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB77_GEMAT
13_2_20cm_scaffold_567_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6232..7725
DNA (1494bp) protein (498aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB76_GEMAT rbh
menaquinone biosynthesis decarboxylase, SCO4490 family
Menaquinone biosynthesis decarboxylase, SCO4490 family {ECO:0000313|EMBL:AHG91443.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_567_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7726..8637
DNA (912bp) protein (304aa)
ubiA; 4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-); K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB75_GEMAT rbh
4-hydroxybenzoate polyprenyltransferase
13_2_20cm_scaffold_567_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8634..9308
DNA (675bp) protein (225aa)
aromatic acid decarboxylase (EC:4.1.1.-); K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Aromatic acid decarboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB74_GEMAT
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
13_2_20cm_scaffold_567_14
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9296..9736
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SH52_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49853.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
13_2_20cm_scaffold_567_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9733..11373
DNA (1641bp) protein (547aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELW4_RUNSL rbh
Peptidase M1 membrane alanine aminopeptidase
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AHG89579.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_567_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11370..11846
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB72_GEMAT
hypothetical protein; K07095 Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_567_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12168..14435
DNA (2268bp) protein (756aa)
ABC transporter transmembrane region n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RX90_9DELT rbh
ABC transporter transmembrane region
ABC transporter transmembrane region {ECO:0000313|EMBL:AHG92935.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_567_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14449..14937
DNA (489bp) protein (163aa)
protein of unknown function DUF1854
Uncharacterized protein {ECO:0000313|EMBL:AHG92934.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=4992536 bin=GWA2__Bacteriovorax-rel_49_15 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
13_2_20cm_scaffold_567_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14934..15761)
DNA (828bp) protein (276aa)
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase/AP lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB70_GEMAT
13_2_20cm_scaffold_567_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15745..17052)
DNA (1308bp) protein (436aa)
phosphoribosylamine/glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIW9_RHOM4
13_2_20cm_scaffold_567_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17049..18044)
DNA (996bp) protein (332aa)
Peptidase M48 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB68_GEMAT
peptidase M48 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M48 family protein
13_2_20cm_scaffold_567_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18111..19280)
DNA (1170bp) protein (390aa)
metC; cystathionine beta-lyase (EC:4.4.1.8); K01758 cystathionine gamma-lyase [EC:4.4.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB67_GEMAT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_2_20cm_scaffold_567_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19337..20422
DNA (1086bp) protein (362aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB66_GEMAT
putative two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator receiver
13_2_20cm_scaffold_567_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20453..21853
DNA (1401bp) protein (467aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB64_GEMAT rbh
13_2_20cm_scaffold_567_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21838..23604
DNA (1767bp) protein (589aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
13_2_20cm_scaffold_567_26
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

23601..24047
DNA (447bp) protein (149aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RBG_16_Acidobacteria_68_9_curated
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B307E2
hypothetical protein
13_2_20cm_scaffold_567_27
unknown

Not on your lists

24126..24836
DNA (711bp) protein (237aa)

This feature has no annotations

13_2_20cm_scaffold_567_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24922..25446
DNA (525bp) protein (175aa)
Maf-like protein GAU_2420 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB56_GEMAT
maf; septum formation protein Maf; K06287 septum formation protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
maf; septum formation protein Maf
13_2_20cm_scaffold_567_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25428..25970)
DNA (543bp) protein (181aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Adenylate cyclase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5A0_SORC5
adenylyl cyclase class-3/4/guanylyl cyclase
13_2_20cm_scaffold_567_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25916..26995)
DNA (1080bp) protein (360aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
cya; adenylate cyclase (EC:4.6.1.1)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI000311DEB5
Displaying items 1-30 of 36 in total

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