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13_2_20cm_scaffold_5681

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5681_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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2..1516
DNA (1515bp) protein (505aa)
serine/threonine protein kinase id=14632647 bin=bin9_gal15 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
serine/threonine protein kinase Tax=CSP1_3_Armatimonadetes
LuxR family transcriptional regulator
13_2_20cm_scaffold_5681_2
unknown

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comp(1524..2081)
DNA (558bp) protein (186aa)

This feature has no annotations

13_2_20cm_scaffold_5681_3
unknown

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2962..3159
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_scaffold_5681_4
unknown

Not on your lists

3622..3813
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_5681_5
unknown

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4554..5249
DNA (696bp) protein (232aa)

This feature has no annotations

13_2_20cm_scaffold_5681_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5246..6190
DNA (945bp) protein (315aa)
Type II secretion system protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USS6_ROSS1
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABQ89679.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseif
13_2_20cm_scaffold_5681_7
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6192..7067
DNA (876bp) protein (292aa)
Type II secretion system protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USS7_ROSS1
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ABQ89680.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseif
13_2_20cm_scaffold_5681_8
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

Not on your lists

7067..7420
DNA (354bp) protein (118aa)
MerR family transcriptional regulator n=1 Tax=Thermus scotoductus RepID=UPI000364150A
MerR family transcriptional regulator Tax=GWB1_OP11_45_5_curated
MerR family transcriptional regulator
13_2_20cm_scaffold_5681_9
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7471..7815)
DNA (345bp) protein (115aa)
Ribosomal silencing factor RsfS n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U169_9DELT
yqeL; Iojap-like protein; K09710 ribosome-associated protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
iojap-like protein
13_2_20cm_scaffold_5681_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(7850..8449)
DNA (600bp) protein (200aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Zixibacteria_53_22_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAT5_AMMDK
13_2_20cm_scaffold_5681_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8446..9420)
DNA (975bp) protein (325aa)
GTPase Obg n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A5T8_THEAQ
putative GTPase; K03979 GTP-binding protein Tax=RBG_16_RIF_CHLX_72_14_curated
Obg family GTPase CgtA
13_2_20cm_scaffold_5681_12
CG_OP9-01, Atribacteria, Bacteria

Not on your lists


comp(9646..9969)
DNA (324bp) protein (108aa)
50S ribosomal protein L27 n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI000347AF39
50S ribosomal protein L25 Tax=CG_OP9-01
LSU ribosomal protein L27P
13_2_20cm_scaffold_5681_13
unknown

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comp(10534..11343)
DNA (810bp) protein (270aa)

This feature has no annotations

13_2_20cm_scaffold_5681_14
unknown

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comp(11340..12383)
DNA (1044bp) protein (348aa)

This feature has no annotations

13_2_20cm_scaffold_5681_15
unknown

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comp(12373..12915)
DNA (543bp) protein (181aa)

This feature has no annotations

13_2_20cm_scaffold_5681_16
unknown

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comp(12915..13853)
DNA (939bp) protein (313aa)

This feature has no annotations

13_2_20cm_scaffold_5681_17
unknown

Not on your lists

13888..14529
DNA (642bp) protein (214aa)

This feature has no annotations

13_2_20cm_scaffold_5681_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14562..14993)
DNA (432bp) protein (144aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KJW1_9PROT
valyl-tRNA synthetase
13_2_20cm_scaffold_5681_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(15795..17015)
DNA (1221bp) protein (407aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG64_RHOM4
valyl-tRNA synthetase
13_2_20cm_scaffold_5681_20
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17134..17934)
DNA (801bp) protein (267aa)
Short-chain dehydrogenase/reductase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KEY0_SACES
Short-chain dehydrogenase/reductase
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:CCH35068.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espana
13_2_20cm_scaffold_5681_21

Not on your lists

comp(18004..18405)
DNA (402bp) protein (134aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=uncultured prokaryote RepID=H5S9H0_9ZZZZ
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000313|EMBL:BAL52806.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
13_2_20cm_scaffold_5681_22
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18402..19226)
DNA (825bp) protein (275aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RBG_16_RIF_CHLX_72_14_curated
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=14628678 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent protease
13_2_20cm_scaffold_5681_23
unknown

Not on your lists

comp(19246..19440)
DNA (195bp) protein (65aa)

This feature has no annotations

13_2_20cm_scaffold_5681_24
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19437..20132)
DNA (696bp) protein (232aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYS7_THEOJ
13_2_20cm_scaffold_5681_25
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20358..21662)
DNA (1305bp) protein (435aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CP83_DESK7
trigger factor Tig
13_2_20cm_scaffold_5681_26
R_SM2F11_45_18, SM2F11, Bacteria

Not on your lists

comp(21695..23836)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FDU6_9BACT
1A family penicillin-binding protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_45_18_curated
putative penicillin-binding protein
13_2_20cm_scaffold_5681_27
unknown

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comp(23960..24487)
DNA (528bp) protein (176aa)

This feature has no annotations

13_2_20cm_scaffold_5681_28
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24498..24755)
DNA (258bp) protein (86aa)
Transporter of the major facilitator superfamily(MFS) n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K2T3_CUPNH
ABC transporter permease {ECO:0000313|EMBL:EWY40461.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella st
major facilitator transporter
Displaying 28 items

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