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13_2_20cm_scaffold_575

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_575_1
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..796
DNA (795bp) protein (265aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DGE9_9GAMM
capsular biosynthesis protein CpsI
Capsular biosynthesis protein CpsI {ECO:0000313|EMBL:AHK79511.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="
13_2_20cm_scaffold_575_2

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comp(823..1164)
DNA (342bp) protein (114aa)
Protein, CopG family protein n=1 Tax=mine drainage metagenome RepID=T0Z3I8_9ZZZZ
Protein, CopG family protein {ECO:0000313|EMBL:EQD38882.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CopG family protein
13_2_20cm_scaffold_575_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1538..1753)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002DD7680
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_2_20cm_scaffold_575_4
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1983..3149
DNA (1167bp) protein (389aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=RBG_16_Gamma2_60_9_curated
DegT/DnrJ/EryC1/StrS aminotransferase id=4103717 bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
putative aminotransferase
13_2_20cm_scaffold_575_5
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3163..4764
DNA (1602bp) protein (534aa)
pgi; glucose-6-phosphate isomerase (GPI) (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
Glucose-6-phosphate isomerase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q5G9_METSZ
13_2_20cm_scaffold_575_6
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4895..7927
DNA (3033bp) protein (1011aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00035C67E4
Sugar transporter {ECO:0000313|EMBL:ERS11281.1}; TaxID=1397533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. EN3.;
ClpX, ATPase regulatory subunit
13_2_20cm_scaffold_575_7
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8022..9011
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IQI1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ12452.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
NAD-dependent epimerase/dehydratase
13_2_20cm_scaffold_575_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9016..9759)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ9_THIDA
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
13_2_20cm_scaffold_575_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9819..11330)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037BC28C
hypothetical protein
Membrane protein involved in the export of O-antigen and teichoic acid-like protein {ECO:0000313|EMBL:ACL73183.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ec
13_2_20cm_scaffold_575_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11491..12396)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8C8_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79246.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
13_2_20cm_scaffold_575_11
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12596..13570)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E2L7_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD95674.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (
13_2_20cm_scaffold_575_12
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14135..14923
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Prochlorococcus sp. W4 RepID=UPI00031CB858
Putative uncharacterized protein {ECO:0000313|EMBL:EFO29981.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium s
hypothetical protein
13_2_20cm_scaffold_575_13
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(14920..16068)
DNA (1149bp) protein (383aa)
Glycosyltransferase id=2867769 bin=GWF2_Planctomycete_41_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Glycosyltransferase Tax=GWF2_Planctomycetes_41_51_curated
glycosyltransferase
13_2_20cm_scaffold_575_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16065..17201)
DNA (1137bp) protein (379aa)
Glycosyl transferase, group 1 n=1 Tax=Vibrio parahaemolyticus BB22OP RepID=L0HT17_VIBPH
glycosyl transferase, group 1
Glycosyl transferase {ECO:0000313|EMBL:AIG62557.1}; Putative glycosyltransferase {ECO:0000313|EMBL:BAQ01795.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
13_2_20cm_scaffold_575_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17198..17911)
DNA (714bp) protein (238aa)
FkbM family methyltransferase id=2896346 bin=GWF2_Lentisphaerae_50_93 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
methyltransferase FkbM family
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
13_2_20cm_scaffold_575_16
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18038..19231
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000377F004
group 1 glycosyl transferase
Group 1 glucosyll transferase {ECO:0000313|EMBL:AFT84654.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
13_2_20cm_scaffold_575_17
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19395..20270
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A1G9_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF98862.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source
13_2_20cm_scaffold_575_18
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20302..21588)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDQ3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX65432.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
13_2_20cm_scaffold_575_19
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21628..22503)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-O17 RepID=UPI00037506C9
Uncharacterized protein {ECO:0000313|EMBL:EIT71956.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
wzz; lipopolysaccharide biosynthesis protein, chain length determinant
13_2_20cm_scaffold_575_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22648..23736
DNA (1089bp) protein (363aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1288494 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLM8_9PROT
gmd-1; GDP-mannose 4,6-dehydratase and GDP-6-deoxy-D-lyxo-4-hexulose reductase
13_2_20cm_scaffold_575_21
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23742..24692
DNA (951bp) protein (317aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAI5_THEAQ rbh
GDP-L-fucose synthase
13_2_20cm_scaffold_575_22
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24772..25539
DNA (768bp) protein (256aa)
glycosyl transferase n=1 Tax=Pseudomonas sp. R81 RepID=UPI00029ABBF2
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:ERH60940.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresc
Displaying 22 items

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