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13_2_20cm_scaffold_7605

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_7605_1
unknown

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83..217
DNA (135bp) protein (45aa)

This feature has no annotations

13_2_20cm_scaffold_7605_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(329..601)
DNA (273bp) protein (91aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histone family protein DNA-binding protein id=4493677 bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator HU subunit alpha
13_2_20cm_scaffold_7605_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(717..3662)
DNA (2946bp) protein (982aa)
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor signal transduction histidine kinase id=3564564 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor hybrid histidine kinase
13_2_20cm_scaffold_7605_4
unknown

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3768..3941
DNA (174bp) protein (58aa)

This feature has no annotations

13_2_20cm_scaffold_7605_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3938..5398
DNA (1461bp) protein (487aa)
ubiD1; 3-octaprenyl-4-hydroxybenzoate carboxylyase UbiD (EC:4.1.1.-) Tax=GWA2_Rokubacteria_73_35_curated
3-octaprenyl-4-hydroxybenzoate carboxylyase UbiD id=3564567 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
menaquinone biosynthesis decarboxylase
13_2_20cm_scaffold_7605_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5413..6240
DNA (828bp) protein (276aa)
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39)
4-hydroxybenzoate polyprenyltransferase id=4493686 bin=GWC2_Methylomirabilis_70_16 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_7605_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6240..6956
DNA (717bp) protein (239aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Demethylmenaquinone methyltransferase id=3564574 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ubiquinone/menaquinone biosynthesis methyltransferase
13_2_20cm_scaffold_7605_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7054..8205
DNA (1152bp) protein (384aa)
homoserine O-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] Tax=GWA2_Rokubacteria_73_35_curated
homoserine o-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase id=3564579 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_7605_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8208..8417
DNA (210bp) protein (70aa)
muconate and chloromuconate cycloisomerase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
13_2_20cm_scaffold_7605_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8357..9271
DNA (915bp) protein (305aa)
Mandelate racemase/muconate lactonizing-like protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PMV4_9EURY
muconate and chloromuconate cycloisomerase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Mandelate racemase/muconate lactonizing protein
13_2_20cm_scaffold_7605_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9456..10310)
DNA (855bp) protein (285aa)
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alpha/beta hydrolase fold id=3564582 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia cenocepacia genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
epoxide hydrolase
13_2_20cm_scaffold_7605_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10380..11741
DNA (1362bp) protein (454aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4493806 bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_7605_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11738..12694
DNA (957bp) protein (319aa)
putative xylanase/chitin deacetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative xylanase/chitin deacetylase id=3837102 bin=GWC2_Methylomirabilis_70_24 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative xylanase/chitin deacetylase
13_2_20cm_scaffold_7605_14
unknown

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13514..13807
DNA (294bp) protein (98aa)

This feature has no annotations

13_2_20cm_scaffold_7605_15
unknown

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14347..15432
DNA (1086bp) protein (362aa)

This feature has no annotations

13_2_20cm_scaffold_7605_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

15443..15910
DNA (468bp) protein (156aa)
id=4956250 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=4956250 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_7605_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15860..16150)
DNA (291bp) protein (97aa)
hypothetical protein id=3564597 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_7605_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16367..17071
DNA (705bp) protein (235aa)
Amidase id=3805175 bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase Tax=GWC2_Rokubacteria_70_16_curated
amidase
Displaying 18 items

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