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13_2_20cm_2_scaffold_10466

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_10466_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=2413346 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_10466_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(386..799)
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2413347 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_10466_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(796..1326)
DNA (531bp) protein (177aa)
Uncharacterized protein id=2413348 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
MaoC-related acyl dehydratase
13_2_20cm_2_scaffold_10466_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1907..2632
DNA (726bp) protein (242aa)
Sugar uptake ABC transport system id=4964305 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar uptake ABC transporter; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
twin-arginine translocation pathway signal
13_2_20cm_2_scaffold_10466_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2688..3665
DNA (978bp) protein (326aa)
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-) id=14626256 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-)
13_2_20cm_2_scaffold_10466_6
unknown

Not on your lists

comp(3834..4118)
DNA (285bp) protein (95aa)

This feature has no annotations

13_2_20cm_2_scaffold_10466_7
unknown

Not on your lists

comp(4119..4433)
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_2_scaffold_10466_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4547..5341
DNA (795bp) protein (265aa)
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein Tax=CSP1_6_Rokubacteria
ycjP; ABC transporter permease; K02026 multiple sugar transport system permease protein id=14626254 bin=bin7_NC10_sister species=Ralstonia pickettii genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Maltose/maltodextrin ABC transporter, permease protein MalG
13_2_20cm_2_scaffold_10466_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5353..5757)
DNA (405bp) protein (135aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14)
Methionine synthase II (Cobalamin-independent) id=2413349 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_10466_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6343..6804)
DNA (462bp) protein (154aa)
Putative sugar ABC transporter, permease protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTP2_9BRAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
sugar ABC transporter permease
13_2_20cm_2_scaffold_10466_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6792..7064)
DNA (273bp) protein (91aa)
ABC transporter permease protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVN2_9PROT
Sugar ABC transporter permease {ECO:0000313|EMBL:KJC51139.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
putative sugar uptake ABC transporter permease
13_2_20cm_2_scaffold_10466_12
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7066..8010)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD8_BRAJP
ABC transporter permease {ECO:0000313|EMBL:KGT73303.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japon
ABC transporter permease
13_2_20cm_2_scaffold_10466_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8007..9311)
DNA (1305bp) protein (435aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTP4_9BRAD
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_2_20cm_2_scaffold_10466_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9501..9698
DNA (198bp) protein (66aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
13_2_20cm_2_scaffold_10466_15
unknown

Not on your lists

comp(9940..10080)
DNA (141bp) protein (47aa)

This feature has no annotations

13_2_20cm_2_scaffold_10466_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10585..10707
DNA (123bp) protein (41aa)
menaquinone biosynthesis protein, family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4781407 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_2_scaffold_10466_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10708..11781
DNA (1074bp) protein (358aa)
cofH1; FO synthase subunit 2 1 (EC:2.5.1.77)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2837977 bin=GWC2_Methylomirabilis_70_24 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_2_scaffold_10466_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11786..12613)
DNA (828bp) protein (276aa)
hypothetical protein; K07083 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hypothetical conserved protein id=4537022 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic solute-binding protein
13_2_20cm_2_scaffold_10466_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12669..13232)
DNA (564bp) protein (188aa)
metal-dependent phosphoesterase; K07053 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627812 bin=bin7_NC10_sister species=Kaistia granuli genus=Kaistia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphoesterase
13_2_20cm_2_scaffold_10466_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13254..13658)
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_2_scaffold_10466_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13760..14365
DNA (606bp) protein (202aa)
id=14627808 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_2_scaffold_10466_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14375..15268)
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=3955123 bin=GWA2_Methylomirabilis_73_35 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_2_scaffold_10466_trna_1
unknown

Not on your lists

comp(15302..15374)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_10466_23
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15653..17620)
DNA (1968bp) protein (656aa)
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein SpalD1_18615 id=4695038 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
13_2_20cm_2_scaffold_10466_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(17888..17995)
DNA (108bp) protein (36aa)
3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=4089441 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 25 items

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