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13_2_20cm_2_scaffold_1048

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1048_1

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14..991
DNA (978bp) protein (326aa)
Integral membrane protein n=2 Tax=mine drainage metagenome RepID=T1CLW1_9ZZZZ
sugar transport family protein
Integral membrane protein {ECO:0000313|EMBL:EQD69825.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_2_20cm_2_scaffold_1048_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(1108..1683)
DNA (576bp) protein (192aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM05_KORVE
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
EmrB/QacA family drug resistance transporter
13_2_20cm_2_scaffold_1048_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1683..2585)
DNA (903bp) protein (301aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM05_KORVE
EmrB/QacA family drug resistance transporter
Drug resistance transporter EmrB/QacA subfamily {ECO:0000313|EMBL:ABF42095.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
13_2_20cm_2_scaffold_1048_4
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(2587..3219)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJP7_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_2_20cm_2_scaffold_1048_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3216..4412)
DNA (1197bp) protein (399aa)
Secretion protein HlyD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM04_KORVE rbh
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABF42096.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_2_20cm_2_scaffold_1048_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4412..5902)
DNA (1491bp) protein (497aa)
Outer membrane efflux protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM03_KORVE rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABF42097.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_2_20cm_2_scaffold_1048_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6183..7073)
DNA (891bp) protein (297aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VWX4_9CYAN
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM65852.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
13_2_20cm_2_scaffold_1048_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7344..7598
DNA (255bp) protein (85aa)
Transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW56_9GAMM
Transglycosylase {ECO:0000313|EMBL:EIL91447.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiph
hypothetical protein
13_2_20cm_2_scaffold_1048_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7691..9082
DNA (1392bp) protein (464aa)
Ethanolamine ammonia-lyase, large subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJD5_SINAD rbh
ethanolamine ammonia-lyase large subunit
Ethanolamine ammonia-lyase, large subunit {ECO:0000313|EMBL:AGA29362.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="
13_2_20cm_2_scaffold_1048_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9083..9901
DNA (819bp) protein (273aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|SAAS:SAAS00064958};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; P
Ethanolamine ammonia-lyase, small subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKK4_SINAD
ethanolamine ammonia-lyase small subunit
13_2_20cm_2_scaffold_1048_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10037..11896
DNA (1860bp) protein (620aa)
Phospholipase C {ECO:0000313|EMBL:ABF43181.1}; EC=3.1.4.3 {ECO:0000313|EMBL:ABF43181.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candida
Phospholipase C n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIW9_KORVE rbh
phospholipase C
13_2_20cm_2_scaffold_1048_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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12084..12842
DNA (759bp) protein (253aa)
protein phosphatase 2C-like protein; K01090 protein phosphatase [EC:3.1.3.16] id=24508631 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
protein phosphatase 2C-like protein; K01090 protein phosphatase [EC:3.1.3.16] Tax=RBG_16_RIF_WS3X_71_46_curated
protein serine/threonine phosphatase
13_2_20cm_2_scaffold_1048_13
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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13088..13597
DNA (510bp) protein (170aa)
transcriptional regulator, BadM/Rrf2 family n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B37BB4
transcriptional regulator Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_2_20cm_2_scaffold_1048_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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13590..14603
DNA (1014bp) protein (338aa)
ABC transporter, substrate-binding protein, aliphatic sulfonates n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITH0_KORVE
ABC transporter, substrate-binding protein, aliphatic sulphonates; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
aliphatic sulfonates ABC transporter substrate-binding protein
13_2_20cm_2_scaffold_1048_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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14600..15526
DNA (927bp) protein (309aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITG9_KORVE rbh
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABF39831.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_2_20cm_2_scaffold_1048_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15510..16271
DNA (762bp) protein (254aa)
ABC aliphatic sulfonate transporter, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITG8_KORVE
ABC aliphatic sulfonate transporter, inner membrane subunit
ABC aliphatic sulfonate transporter, inner membrane subunit {ECO:0000313|EMBL:ABF39832.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
13_2_20cm_2_scaffold_1048_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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16450..18123
DNA (1674bp) protein (558aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITG4_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_2_scaffold_1048_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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18319..19296
DNA (978bp) protein (326aa)
GalE; UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
UDP-glucose 4-epimerase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSC9_CHLT3
UDP-glucose 4-epimerase
13_2_20cm_2_scaffold_1048_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(19367..20914)
DNA (1548bp) protein (516aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS62_KORVE rbh
lysyl-tRNA synthetase
13_2_20cm_2_scaffold_1048_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21099..21455
DNA (357bp) protein (119aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS61_KORVE
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
13_2_20cm_2_scaffold_1048_21
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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21531..21845
DNA (315bp) protein (105aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFO66914.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCAD
Putative uncharacterized protein id=2257256 bin=GWB2_Elusimicrobia_63_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Displaying 21 items

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