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13_2_20cm_2_scaffold_1114

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1114_1
unknown

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comp(3..524)
DNA (522bp) protein (174aa)

This feature has no annotations

13_2_20cm_2_scaffold_1114_2
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1553..2047
DNA (495bp) protein (165aa)
Allantoinase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CMI8_MYXFH
allantoinase
Allantoinase {ECO:0000313|EMBL:AEI65267.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus
13_2_20cm_2_scaffold_1114_3
RLO_PLX_64_10, Bacteria

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2013..2972
DNA (960bp) protein (320aa)
allantoicase (EC:3.5.3.4); K01477 allantoicase [EC:3.5.3.4] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
allantoicase (EC:3.5.3.4)
Probable allantoicase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13U75_BURXL
13_2_20cm_2_scaffold_1114_4
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2969..3460
DNA (492bp) protein (164aa)
Probable allantoicase n=1 Tax=Frankia sp. CN3 RepID=G6HFN1_9ACTO
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase {ECO:0000313|EMBL:AKF09419.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sand
putative OHCU decarboxylase
13_2_20cm_2_scaffold_1114_5
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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3457..3795
DNA (339bp) protein (113aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A380_9GAMM
5-hydroxyisourate hydrolase
13_2_20cm_2_scaffold_1114_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3806..5002
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GFI3_9GAMM rbh
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE21862.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
13_2_20cm_2_scaffold_1114_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5090..5392
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_1114_8
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5389..6486)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PFV3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFE62503.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_2_20cm_2_scaffold_1114_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6483..7313)
DNA (831bp) protein (277aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT7_HALO1
FAD-binding molybdopterin dehydrogenase protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FAD-binding molybdopterin dehydrogenase protein
13_2_20cm_2_scaffold_1114_10
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7310..7792)
DNA (483bp) protein (161aa)
(2Fe-2S)-binding domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJT8_HALO1
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACY18445.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Ha
13_2_20cm_2_scaffold_1114_11

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comp(7800..10019)
DNA (2220bp) protein (740aa)
Putative xanthine dehydrogenase n=1 Tax=uncultured bacterium 66 RepID=E3T662_9BACT
Putative xanthine dehydrogenase {ECO:0000313|EMBL:ADC35806.1}; TaxID=698391 species="Bacteria; environmental samples.;" source="uncultured bacterium 66.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_2_20cm_2_scaffold_1114_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10080..10565
DNA (486bp) protein (162aa)
carbon monoxide dehydrogenase (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aldehyde oxidase small subunit; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] id=1245289 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aldehyde oxidase small subunit
13_2_20cm_2_scaffold_1114_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10582..12927
DNA (2346bp) protein (782aa)
putative carbon monoxide dehydrogenase large chain (EC:1.2.99.2) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tmr:Tmar_1478 xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) id=1245294 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative carbon monoxide dehydrogenase large chain (EC:1.2.99.2)
13_2_20cm_2_scaffold_1114_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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12924..13805
DNA (882bp) protein (294aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
carbon monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] id=14631764 bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
molybdopterin dehydrogenase FAD-binding protein
13_2_20cm_2_scaffold_1114_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13927..14724
DNA (798bp) protein (266aa)
putative polyketide cyclase Tax=RBG_16_Gemmatimonadetes_66_8_curated
tro:trd_0580 putative polyketide cyclase id=1245293 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative polyketide cyclase
13_2_20cm_2_scaffold_1114_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14734..15948
DNA (1215bp) protein (405aa)
amidase (EC:3.5.1.4); K01426 amidase [EC:3.5.1.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidase (EC:3.5.1.4)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MSX8_9ACTO
13_2_20cm_2_scaffold_1114_17
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(15945..17465)
DNA (1521bp) protein (507aa)
TPR repeat-containing protein id=16791960 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
TPR repeat-containing protein Tax=RBG_16_Aminicenantes_63_16_curated
13_2_20cm_2_scaffold_1114_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(17608..18807)
DNA (1200bp) protein (400aa)
AMP-dependent synthetase and ligase (EC:6.2.1.3) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
AMP-dependent synthetase and ligase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HNH6_CYAP4
AMP-dependent synthetase/ligase
13_2_20cm_2_scaffold_1114_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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19398..20216
DNA (819bp) protein (273aa)
Secreted protein n=1 Tax=uncultured microorganism RepID=F8UH26_9ZZZZ
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
13_2_20cm_2_scaffold_1114_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(20234..21613)
DNA (1380bp) protein (460aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N9_GEMAT
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein kinase
13_2_20cm_2_scaffold_1114_21
unknown

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comp(21803..22066)
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_2_scaffold_1114_22
unknown

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22229..22840
DNA (612bp) protein (204aa)

This feature has no annotations

13_2_20cm_2_scaffold_1114_23
unknown

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22913..23485
DNA (573bp) protein (191aa)

This feature has no annotations

13_2_20cm_2_scaffold_1114_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23809..24519
DNA (711bp) protein (237aa)
RND family efflux transporter MFP subunit n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AH91_9PROT
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG89464.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 24 items

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