ggKbase home page

13_2_20cm_2_scaffold_1348

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1348_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3..473
DNA (471bp) protein (157aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
small GTP-binding protein
13_2_20cm_2_scaffold_1348_2
unknown

Not on your lists

551..958
DNA (408bp) protein (136aa)

This feature has no annotations

13_2_20cm_2_scaffold_1348_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1111..1968
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D1C16
ATP-dependent protease Lon Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ATP-dependent protease Lon
13_2_20cm_2_scaffold_1348_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1965..2957
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D1C16
ATP-dependent protease Lon Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ATP-dependent protease Lon
13_2_20cm_2_scaffold_1348_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

3004..3552
DNA (549bp) protein (183aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1); K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=RBG_16_Euryarchaeota_68_13_curated
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAJ9_ACIB4
13_2_20cm_2_scaffold_1348_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3740..4411)
DNA (672bp) protein (224aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_1348_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4408..5769)
DNA (1362bp) protein (454aa)
Putative membrane protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKQ9_ACIS0
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_2_scaffold_1348_8

Not on your lists

comp(5866..7440)
DNA (1575bp) protein (525aa)
Putative uncharacterized protein hyuB {ECO:0000313|EMBL:CBH38595.1}; EC=3.5.2.9 {ECO:0000313|EMBL:CBH38595.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
5-oxoprolinase (EC:3.5.2.9)
Putative uncharacterized protein hyuB n=1 Tax=uncultured archaeon RepID=D1J915_9ARCH
13_2_20cm_2_scaffold_1348_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7437..9446)
DNA (2010bp) protein (670aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABG05338.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABG05338.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterin
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATE0_RUBXD
13_2_20cm_2_scaffold_1348_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9493..10836)
DNA (1344bp) protein (448aa)
tryptophan synthase subunit beta (EC:4.2.1.20) Tax=RBG_16_Euryarchaeota_68_13_curated
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I638_METCZ
13_2_20cm_2_scaffold_1348_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10969..11469
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000367ACEC
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_2_scaffold_1348_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11589..12149
DNA (561bp) protein (187aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_1348_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(12123..12542)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI000373D00E
hypothetical protein; K06929 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CoA-binding protein
13_2_20cm_2_scaffold_1348_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12575..13030)
DNA (456bp) protein (152aa)
Nudix hydrolase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYH3_9RHOB
7,8-dihydro-8-oxoguanine-triphosphatase/thiamin-phosphate pyrophosphorylase-like protein Tax=RBG_16_Euryarchaeota_68_13_curated
NUDIX hydrolase
13_2_20cm_2_scaffold_1348_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13086..14519
DNA (1434bp) protein (478aa)
Single-stranded DNA-specific exonuclease n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNC5_ACIS0
single-stranded DNA-specific exonuclease Tax=RBG_16_Euryarchaeota_67_27_curated
single-stranded DNA-specific exonuclease
13_2_20cm_2_scaffold_1348_16
crenarchaeote SCGC AAA261-N23, Crenarchaeota, Archaea

Not on your lists

comp(14563..15090)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00037A42DD
13_2_20cm_2_scaffold_1348_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


15231..15542
DNA (312bp) protein (104aa)
50S ribosomal protein L7Ae n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TCL4_9EURY
rpl7ae; 50S ribosomal protein L7Ae Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl7ae; 50S ribosomal protein L7Ae
13_2_20cm_2_scaffold_1348_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


15572..15784
DNA (213bp) protein (71aa)
30S ribosomal protein S28 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036CA907
rps28e; 30S ribosomal protein S28e Tax=RBG_16_Euryarchaeota_68_13_curated
SSU ribosomal protein S28e
13_2_20cm_2_scaffold_1348_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15789..16403
DNA (615bp) protein (205aa)
50S ribosomal protein L24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T689_9EURY
50S ribosomal protein L24e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosomal protein L24E
13_2_20cm_2_scaffold_1348_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16400..16858
DNA (459bp) protein (153aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Nucleoside diphosphate kinase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGY9_ARCPA
Nucleoside diphosphate kinase
13_2_20cm_2_scaffold_1348_21
unknown

Not on your lists

comp(16931..17260)
DNA (330bp) protein (110aa)

This feature has no annotations

13_2_20cm_2_scaffold_1348_22
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

17368..19140
DNA (1773bp) protein (591aa)
Probable translation initiation factor IF-2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T9H2_ACIB4
translation initiation factor aIF-2; K03243 translation initiation factor 5B Tax=RBG_16_Euryarchaeota_68_13_curated
translation initiation factor aIF-2
13_2_20cm_2_scaffold_1348_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

19196..20053
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037CC798
acyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
N-acetyltransferase GCN5
13_2_20cm_2_scaffold_1348_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

20080..20277
DNA (198bp) protein (66aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying 24 items

View Taxonomy