ggKbase home page

13_2_20cm_2_scaffold_1358

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1358_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2..373
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038011BC
protein of unknown function DUF6 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG91799.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_1358_2
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

370..1728
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000373C166
major facilitator superfamily protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
13_2_20cm_2_scaffold_1358_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1572..1922)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036BBADF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
13_2_20cm_2_scaffold_1358_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2037..3233
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J8R2_ANAD2
major facilitator transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
major facilitator superfamily protein
13_2_20cm_2_scaffold_1358_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3394..5364
DNA (1971bp) protein (657aa)
Putative elongation factor G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I9_GEMAT
putative elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
small GTP-binding protein
13_2_20cm_2_scaffold_1358_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5361..6344
DNA (984bp) protein (328aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89323.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=14632678 bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
13_2_20cm_2_scaffold_1358_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

6481..7167
DNA (687bp) protein (229aa)
Response regulator uvrY n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1R6_THERP
response regulator uvrY
Response regulator uvrY {ECO:0000313|EMBL:ACM05190.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATC
13_2_20cm_2_scaffold_1358_8
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(7181..9619)
DNA (2439bp) protein (813aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHX4_9BACT
peptidase M1 membrane alanine aminopeptidase Tax=RBG_16_Zixibacteria_50_21_curated
aminopeptidase N-like
13_2_20cm_2_scaffold_1358_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9718..10797)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003821674
kamA; Lysine 2,3-aminomutase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
kamA; Lysine 2,3-aminomutase
13_2_20cm_2_scaffold_1358_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10769..11269)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI00037944CE
N-acetyltransferase GCN5 Tax=RBG_16_Gemmatimonadetes_66_8_curated
N-acetyltransferase
13_2_20cm_2_scaffold_1358_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11220..12245)
DNA (1026bp) protein (342aa)
D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein id=2423735 bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ATP-grasp enzyme, D-alanine-D-alanine ligase
13_2_20cm_2_scaffold_1358_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12242..13327)
DNA (1086bp) protein (362aa)
D-alanine-D-alanine ligase-like protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YWW1_MELRP
D-alanine-D-alanine ligase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein
13_2_20cm_2_scaffold_1358_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13465..15702)
DNA (2238bp) protein (746aa)
Thymidylate synthase ThyX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J0_GEMAT
putative FAD linked oxidase; K06911 Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD linked oxidase domain protein
13_2_20cm_2_scaffold_1358_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15867..16481
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000373C3C0
hypothetical protein; K09729 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF116
13_2_20cm_2_scaffold_1358_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16489..17046)
DNA (558bp) protein (186aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_1358_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17050..17592)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607D5_METCA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_1358_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17635..18522)
DNA (888bp) protein (296aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJN9_9BACT
13_2_20cm_2_scaffold_1358_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18551..19384)
DNA (834bp) protein (278aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_1358_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19387..20223)
DNA (837bp) protein (279aa)
Band 7 protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY0_DESB2
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_1358_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20235..21440)
DNA (1206bp) protein (402aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative acyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase id=1250066 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_2_20cm_2_scaffold_1358_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21579..22859)
DNA (1281bp) protein (427aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 21 items

View Taxonomy