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13_2_20cm_2_scaffold_143

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_143_1
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(3..1184)
DNA (1182bp) protein (394aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
Phosphoenolpyruvate synthase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RXR3_THEPD
13_2_20cm_2_scaffold_143_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(1190..1744)
DNA (555bp) protein (185aa)
50S ribosomal protein L16 n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000367F825
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=RBG_16_Archaea_50_20_curated
rpl10e; 50S ribosomal protein L10e
13_2_20cm_2_scaffold_143_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1911..2420)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P9E3_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_2_scaffold_143_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2451..3125)
DNA (675bp) protein (225aa)
Putative amidohydrolase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC05_9EURY
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_2_20cm_2_scaffold_143_5
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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3431..6880
DNA (3450bp) protein (1150aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_13_Euryarchaeota_57_23_curated
hypothetical protein
13_2_20cm_2_scaffold_143_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(6901..7530)
DNA (630bp) protein (210aa)
methyltransferase (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12W29_METBU
ribosomal L11 methyltransferase; K07579 putative methylase Tax=RBG_16_Bathyarchaeota_48_13_curated
13_2_20cm_2_scaffold_143_7
unknown

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comp(7532..8539)
DNA (1008bp) protein (336aa)
Diphthamide synthase, subunit DPH2 n=3 Tax=Methanobrevibacter smithii RepID=A5UMY5_METS3 id=5103039 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Diphthamide synthase, subunit DPH2 n=3 Tax=Methanobrevibacter smithii RepID=A5UMY5_METS3 Tax=AR20
Diphthamide synthase, subunit DPH2
13_2_20cm_2_scaffold_143_8
unknown

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8672..9049
DNA (378bp) protein (126aa)

This feature has no annotations

13_2_20cm_2_scaffold_143_9
unknown

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9127..9597
DNA (471bp) protein (157aa)

This feature has no annotations

13_2_20cm_2_scaffold_143_10
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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9672..10880
DNA (1209bp) protein (403aa)
putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-) Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
monooxygenase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B19E
13_2_20cm_2_scaffold_143_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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10904..11545
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCR0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88174.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
13_2_20cm_2_scaffold_143_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(11576..11917)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T5A0_9EURY
Uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_143_13
unknown

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comp(12220..12969)
DNA (750bp) protein (250aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
13_2_20cm_2_scaffold_143_14
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(12972..15341)
DNA (2370bp) protein (790aa)
Exonuclease SbcCD, C subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X1_9ARCH rbh
exonuclease SbcCD, C subunit
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:BAJ48040.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
13_2_20cm_2_scaffold_143_15
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(15338..16492)
DNA (1155bp) protein (385aa)
Exonuclease SbcCD, D subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X0_9ARCH
exonuclease SbcCD, D subunit
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:BAJ48039.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
13_2_20cm_2_scaffold_143_16
unknown

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16722..17156
DNA (435bp) protein (145aa)

This feature has no annotations

13_2_20cm_2_scaffold_143_17
unknown

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comp(17201..18319)
DNA (1119bp) protein (373aa)

This feature has no annotations

13_2_20cm_2_scaffold_143_18
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(18932..19588)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000381FE34
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
13_2_20cm_2_scaffold_143_19
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19704..20606)
DNA (903bp) protein (301aa)
cation diffusion facilitator family transporter Tax=RBG_16_Deltaproteobacteria_54_11_curated
Cobalt-zinc-cadmium resistance protein CzcD id=4002241 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cation efflux family protein
13_2_20cm_2_scaffold_143_20
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(20907..21524)
DNA (618bp) protein (206aa)
Rhomboid family protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REN6_ARCPA
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ADB58580.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (
13_2_20cm_2_scaffold_143_21
unknown

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21648..22148
DNA (501bp) protein (167aa)

This feature has no annotations

13_2_20cm_2_scaffold_143_22
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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22397..24490
DNA (2094bp) protein (698aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI00035D69AD
putative hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
cell surface protein
13_2_20cm_2_scaffold_143_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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24574..25341
DNA (768bp) protein (256aa)
cell surface protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B612A2
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_67_27_curated
PKD domain containing protein
13_2_20cm_2_scaffold_143_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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25432..26706
DNA (1275bp) protein (425aa)
peptidase, ArgE/DapE family; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RBG_16_Euryarchaeota_41_19_curated
Possible succinyl-diaminopimelate desuccinylase n=1 Tax=uncultured archaeon GZfos27G5 RepID=Q64B38_9ARCH
Peptidase, ArgE/DapE family
13_2_20cm_2_scaffold_143_25
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

26959..27222
DNA (264bp) protein (88aa)
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
Displaying 25 items

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