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13_2_20cm_2_scaffold_1443

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1443_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(48..998)
DNA (951bp) protein (317aa)
SpoIID/LytB domain n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT78_9FIRM
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain protein
13_2_20cm_2_scaffold_1443_2
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1078..2364)
DNA (1287bp) protein (429aa)
hemL; glutamate-1-semialdehyde aminomutase HemL (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde aminomutase HemL n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V821_9CHRO
13_2_20cm_2_scaffold_1443_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2361..3680)
DNA (1320bp) protein (440aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT
Ribosomal protein S12 methylthiotransferase rimO
13_2_20cm_2_scaffold_1443_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3677..4000)
DNA (324bp) protein (108aa)
UPF0234 protein Desmer_2757 n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J010_DESMD
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
13_2_20cm_2_scaffold_1443_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3997..4923)
DNA (927bp) protein (309aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_2_scaffold_1443_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(5025..5795)
DNA (771bp) protein (257aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_2_20cm_2_scaffold_1443_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6129..7619)
DNA (1491bp) protein (497aa)
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_1443_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7640..8140)
DNA (501bp) protein (167aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_2_20cm_2_scaffold_1443_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8140..9528)
DNA (1389bp) protein (463aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
putative NtrC family two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative NtrC family two-component response regulator
13_2_20cm_2_scaffold_1443_10
unknown

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comp(9525..10169)
DNA (645bp) protein (215aa)

This feature has no annotations

13_2_20cm_2_scaffold_1443_11

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comp(10177..10734)
DNA (558bp) protein (186aa)
2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3U3_PELTS
2'-5' RNA ligase {ECO:0000313|EMBL:BAL56049.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
LigT; 2'-5' RNA ligase
13_2_20cm_2_scaffold_1443_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10731..11540)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUC4_9BACT
hypothetical protein; K06864 uncharacterized protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Conserved hypothetical protein CHP00268
13_2_20cm_2_scaffold_1443_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11699..12184
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P479_9BACT
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV79279.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (
13_2_20cm_2_scaffold_1443_14
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12186..13160
DNA (975bp) protein (325aa)
Putative membrane protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EFN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJS17429.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
protein of unknown function DUF6 transmembrane
13_2_20cm_2_scaffold_1443_15
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13207..13566
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZJ38_BREBN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAH45413.1}; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (strain
13_2_20cm_2_scaffold_1443_16
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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13532..13876
DNA (345bp) protein (115aa)
antibiotic biosynthesis monooxygenase Tax=RBG_16_Gammaproteobacteria_66_13_curated
antibiotic biosynthesis monooxygenase id=1245775 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_2_20cm_2_scaffold_1443_17
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13901..14851)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CE211 rbh
transporter, MscS family Tax=CG_Ignavi_02
mechanosensitive ion channel protein MscS
13_2_20cm_2_scaffold_1443_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14942..16009
DNA (1068bp) protein (356aa)
succinylglutamate desuccinylase/aspartoacylase Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=8265623 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
succinylglutamate desuccinylase/aspartoacylase
13_2_20cm_2_scaffold_1443_19
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(16019..17554)
DNA (1536bp) protein (512aa)
Putative chaperone; K07391 magnesium chelatase family protein id=7202493 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06 rbh
Putative chaperone; K07391 magnesium chelatase family protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
transcriptional regulator
13_2_20cm_2_scaffold_1443_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17689..20361
DNA (2673bp) protein (891aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88767.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 20 items

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