ggKbase home page

13_2_20cm_2_scaffold_1481

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1481_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(168..929)
DNA (762bp) protein (254aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator, TrmB-like
13_2_20cm_2_scaffold_1481_2
uncultured marine crenarchaeote AD1000-23-H12, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

1087..2238
DNA (1152bp) protein (384aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G0_9ARCH
Dinitrogenase iron-molybdenum cofactor biosynthesis {ECO:0000313|EMBL:ACF09884.1}; TaxID=526638 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine c
chromosome partitioning ATPase
13_2_20cm_2_scaffold_1481_3
unknown

Not on your lists

comp(2261..2482)
DNA (222bp) protein (74aa)

This feature has no annotations

13_2_20cm_2_scaffold_1481_4
Desulfurococcus mucosus, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

2884..3159
DNA (276bp) protein (92aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=765177 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfu
Acylphosphatase n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8R8D9_DESM0
acylphosphatase
13_2_20cm_2_scaffold_1481_trna_1
unknown

Not on your lists

3262..3337
DNA (76bp)
transferRNA
13_2_20cm_2_scaffold_1481_5
unknown

Not on your lists

comp(3372..3845)
DNA (474bp) protein (158aa)

This feature has no annotations

13_2_20cm_2_scaffold_1481_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4417..4737)
DNA (321bp) protein (107aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_2_20cm_2_scaffold_1481_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

5750..6064
DNA (315bp) protein (105aa)
DUF59 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
putative metal-sulfur cluster biosynthetic enzyme
13_2_20cm_2_scaffold_1481_8
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(6285..6989)
DNA (705bp) protein (235aa)
MIP family channel protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DSA3_METV3
MIP family channel protein
MIP family channel protein {ECO:0000313|EMBL:ADI36013.1}; Flags: Precursor;; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Met
13_2_20cm_2_scaffold_1481_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7147..9003
DNA (1857bp) protein (619aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
korA; 2-oxoglutarate synthase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVM2_9BACT
13_2_20cm_2_scaffold_1481_10
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

8996..9925
DNA (930bp) protein (310aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:BAJ48840.1}; EC=1.2.7.3 {ECO:0000313|EMBL:BAJ48840.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeo
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N971_9ARCH
13_2_20cm_2_scaffold_1481_11
Fervidicoccus fontis, Fervidicoccus, Fervidicoccales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(10156..10935)
DNA (780bp) protein (260aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1163730 species=
NH(3)-dependent NAD(+) synthetase n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A163_FERFK
NH(3)-dependent NAD(+) synthetase
13_2_20cm_2_scaffold_1481_12
Thermococcus cleftensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(10978..12237)
DNA (1260bp) protein (420aa)
Proteasome-activating nucleotidase n=1 Tax=Thermococcus sp. CL1 RepID=I3ZV04_9EURY
proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
13_2_20cm_2_scaffold_1481_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(12491..13030)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJC3_THEBM
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_1481_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13435..13728
DNA (294bp) protein (98aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein id=14429902 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
AsnC family transcriptional regulator
13_2_20cm_2_scaffold_1481_15
unknown

Not on your lists

comp(14012..15088)
DNA (1077bp) protein (359aa)

This feature has no annotations

13_2_20cm_2_scaffold_1481_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15310..16767
DNA (1458bp) protein (486aa)
aldY5; aldehyde dehydrogenase (EC:1.2.1.3)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037114AE
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
13_2_20cm_2_scaffold_1481_17
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16771..17181)
DNA (411bp) protein (137aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KP51_9FIRM
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_13_Deltaproteobacteria_53_10_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_2_20cm_2_scaffold_1481_18
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17187..18341)
DNA (1155bp) protein (385aa)
Acetyl-CoA acetyltransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5V0_DESTA rbh
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFM24941.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomon
13_2_20cm_2_scaffold_1481_19
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(18402..18710)
DNA (309bp) protein (103aa)
ethyl tert-butyl ether degradation EthD Tax=RBG_16_Chloroflexi_56_8_curated
ethyl tert-butyl ether degradation EthD id=24418701 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_2_20cm_2_scaffold_1481_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18724..19725)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036D6CCD
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_2_scaffold_1481_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19795..20589)
DNA (795bp) protein (265aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17); K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=RBG_16_Archaea_50_20_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9G6_9BACI
13_2_20cm_2_scaffold_1481_22
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20591..20701)
DNA (111bp) protein (37aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI000307D888
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EWG09085.1}; TaxID=1307436 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus firmus DS1.;"
enoyl-CoA hydratase/isomerase
Displaying 23 items

View Taxonomy