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13_2_20cm_2_scaffold_1652

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1652_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..513)
DNA (513bp) protein (171aa)
Putative phosphohydrolase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUA9_9BACT
Putative phosphohydrolase {ECO:0000313|EMBL:CDD25250.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipe
metallophosphoesterase
13_2_20cm_2_scaffold_1652_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1107..1835
DNA (729bp) protein (243aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BES1_STRRD
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:ACZ84434.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangi
13_2_20cm_2_scaffold_1652_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1842..2726)
DNA (885bp) protein (295aa)
succinate dehydrogenase, subunit C; K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] Tax=RBG_16_Actinobacteria_68_12_curated
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase n=2 Tax=Sulfurihydrogenibium RepID=B2V7U6_SULSY
13_2_20cm_2_scaffold_1652_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2723..3796)
DNA (1074bp) protein (358aa)
sdhB; succinate dehydrogenase/fumarate reductase Fe-s protein subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RBG_16_Actinobacteria_68_12_curated
sdhB; succinate dehydrogenase/fumarate reductase Fe-s protein subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] id=15193802 bin=GWC2_NOV_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
succinate dehydrogenase subunit B (EC:1.3.5.1)
13_2_20cm_2_scaffold_1652_5
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3796..5478)
DNA (1683bp) protein (561aa)
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=GWC2_Deltaproteobacteria_42_11_curated
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA31_9BACT
13_2_20cm_2_scaffold_1652_6
unknown

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comp(5536..5685)
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_2_scaffold_1652_7
unknown

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comp(5666..5818)
DNA (153bp) protein (51aa)

This feature has no annotations

13_2_20cm_2_scaffold_1652_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5884..6825)
DNA (942bp) protein (314aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Rhizobium sp. AP16 RepID=J2DDF9_9RHIZ
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
phosphoenolpyruvate carboxykinase [ATP]
13_2_20cm_2_scaffold_1652_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7479..8039
DNA (561bp) protein (187aa)
GCN5-related N-acetyltransferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E4J2_9ACTN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHN11398.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patuli
acetyltransferase
13_2_20cm_2_scaffold_1652_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8074..8901
DNA (828bp) protein (276aa)
Tyrosine recombinase XerC n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B9_CONWI
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
13_2_20cm_2_scaffold_1652_11
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9131..10039
DNA (909bp) protein (303aa)
Tyrosine recombinase XerD n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKQ0_THEM7
tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source
13_2_20cm_2_scaffold_1652_12
unknown

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comp(10223..10717)
DNA (495bp) protein (165aa)

This feature has no annotations

13_2_20cm_2_scaffold_1652_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(10714..11802)
DNA (1089bp) protein (363aa)
citrate (Si)-synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RBG_16_Actinobacteria_67_10_curated
citrate (Si)-synthase (EC:2.3.3.1)
citrate synthase n=1 Tax=Streptomyces prunicolor RepID=UPI000378EE2E
13_2_20cm_2_scaffold_1652_14
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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11859..12950
DNA (1092bp) protein (364aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41) Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000365B819
isocitrate/isopropylmalate dehydrogenase
13_2_20cm_2_scaffold_1652_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12971..13876
DNA (906bp) protein (302aa)
malate dehydrogenase (NAD) (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Actinobacteria_68_12_curated
Malate dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKN0_CHLTF
malate dehydrogenase, NAD-dependent
13_2_20cm_2_scaffold_1652_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14037..14780
DNA (744bp) protein (248aa)
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036D9B09
short-chain dehydrogenase/reductase SDR
13_2_20cm_2_scaffold_1652_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14845..15876
DNA (1032bp) protein (344aa)
Putative secreted protein containing a PDZ domain n=1 Tax=Brevibacillus sp. CF112 RepID=J2IE94_9BACL
PDZ/DHR/GLGF domain-containing protein; K07177 PDZ domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
ylbL; putative protein YlbL
13_2_20cm_2_scaffold_1652_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15999..16184
DNA (186bp) protein (62aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_2_scaffold_1652_19
unknown

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16391..16648
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_2_scaffold_1652_20
unknown

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comp(16613..16738)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 20 items

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