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13_2_20cm_2_scaffold_1697

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1697_1
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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2..208
DNA (207bp) protein (69aa)
hypothetical protein; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLE8_ACIS0
nicotinamide-nucleotide adenylyltransferase
13_2_20cm_2_scaffold_1697_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(201..995)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) RepID=A1RQF4_PYRIL
hypothetical protein; K09134 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_2_20cm_2_scaffold_1697_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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1094..2245
DNA (1152bp) protein (384aa)
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9P6_NITGG
aminotransferase OR putativesoluble hydrogenase, small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
aminotransferase OR putativesoluble hydrogenase, small subunit
13_2_20cm_2_scaffold_1697_4
RBG_16_Archaea_50_20_curated, Archaea

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2250..3140
DNA (891bp) protein (297aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Archaea_50_20_curated
FKBP-type peptidylprolyl isomerase id=14428048 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_2_20cm_2_scaffold_1697_5
RBG_16_Archaea_50_20_curated, Archaea

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3278..3802
DNA (525bp) protein (175aa)
proteasome subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RBG_16_Archaea_50_20_curated
proteasome endopeptidase complex subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY12_METFV
13_2_20cm_2_scaffold_1697_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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3807..5726
DNA (1920bp) protein (640aa)
Cleavage and polyadenylation specifity factor protein n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=Q8U124_PYRFU
kh-domain/beta-lactamase-domain protein; K07041 Tax=RBG_13_Bathyarchaeota_38_9_curated
cleavage and polyadenylation specifity factor protein
13_2_20cm_2_scaffold_1697_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(5723..6049)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=G3C9I1_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Protein of unknown function (DUF552)
13_2_20cm_2_scaffold_1697_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(6145..6645)
DNA (501bp) protein (167aa)
PUA domain containing protein n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A8N6_METM6
putative RNA-binding protein; K07575 PUA domain protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein
13_2_20cm_2_scaffold_1697_9
unknown

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7156..9828
DNA (2673bp) protein (891aa)

This feature has no annotations

13_2_20cm_2_scaffold_1697_10
RBG_16_Archaea_50_20_curated, Archaea

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10133..11542
DNA (1410bp) protein (470aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RBG_16_Archaea_50_20_curated
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DNL9_STAMF
13_2_20cm_2_scaffold_1697_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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11509..11733
DNA (225bp) protein (75aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Glycyl-tRNA synthetase n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8A9Z8_IGNH4
Suspect SCG annotation. See neighboring gene [13_2_20cm_2_scaffold_1697_10].
glycyl-tRNA synthetase
13_2_20cm_2_scaffold_1697_12
RBG_16_Archaea_50_20_curated, Archaea

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11799..12461
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8B5_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_2_scaffold_1697_13
RBG_16_Archaea_50_20_curated, Archaea

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12469..13038
DNA (570bp) protein (190aa)
endA1; tRNA-splicing endonuclease (EC:3.1.27.9) Tax=RBG_16_Archaea_50_20_curated
tRNA-intron endonuclease (EC:4.6.1.16)
tRNA intron endonuclease n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E5K3_9ARCH
13_2_20cm_2_scaffold_1697_14
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(13056..14258)
DNA (1203bp) protein (401aa)
Peptidase M24 n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QPW0_VULDI rbh
peptidase M24 Tax=RBG_13_Bathyarchaeota_52_12_curated
peptidase M24
13_2_20cm_2_scaffold_1697_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(14352..14939)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037F1D50
hsp20; heat shock protein Hsp20 Tax=RBG_13_Bathyarchaeota_38_9_curated
hsp20-4; heat shock protein Hsp20
13_2_20cm_2_scaffold_1697_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(14926..15510)
DNA (585bp) protein (195aa)
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_1697_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(15777..16280)
DNA (504bp) protein (168aa)
Amino acid-binding ACT domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5L0_METSW
amino acid-binding ACT domain-containing protein; K07103 Tax=RBG_13_Bathyarchaeota_38_9_curated
amino acid-binding ACT domain-containing protein
13_2_20cm_2_scaffold_1697_18
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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16358..17719
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037A4D5F
tryptophan synthase subunit beta Tax=RBG_16_Thaumarchaeota_49_8_curated
tryptophan synthase like subunit beta
13_2_20cm_2_scaffold_1697_19
Bacillus pseudofirmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(18469..19761)
DNA (1293bp) protein (431aa)
Acyl-CoA dehydrogenase n=1 Tax=Bacillus pseudofirmus (strain OF4) RepID=D3FPQ8_BACPE
mmqC; acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ADC49468.1}; TaxID=398511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pseudofirmus (strain OF4).;"
13_2_20cm_2_scaffold_1697_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(19821..21404)
DNA (1584bp) protein (528aa)
UPF0219 protein Mfer_0083 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWZ8_METFV
hydroxymethylglutaryl-CoA synthase Tax=RBG_13_Bathyarchaeota_38_9_curated
hydroxymethylglutaryl-CoA synthase
13_2_20cm_2_scaffold_1697_21
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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21653..23404
DNA (1752bp) protein (584aa)
peptidase M6, immune inhibitor A; K09607 immune inhibitor A [EC:3.4.24.-] Tax=RBG_16_Chloroflexi_54_18_curated
13_2_20cm_2_scaffold_1697_22
unknown

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comp(23330..23902)
DNA (573bp) protein (191aa)

This feature has no annotations

13_2_20cm_2_scaffold_1697_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(23909..24727)
DNA (819bp) protein (273aa)
ABC transporter related n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH16_METPE
taurine-transporting AtPase; K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
ABC transporter
13_2_20cm_2_scaffold_1697_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(24731..25540)
DNA (810bp) protein (270aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJB4_9FIRM
ssuC1; aliphatic sulfonates ABC transporter permease SsuC Tax=RBG_16_Archaea_50_20_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
13_2_20cm_2_scaffold_1697_25
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(25781..27025)
DNA (1245bp) protein (415aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRX5_METIM
13_2_20cm_2_scaffold_1697_26
RBG_16_Archaea_50_20_curated, Archaea

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27255..28478
DNA (1224bp) protein (408aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RBG_16_Archaea_50_20_curated
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000372A517
Displaying 26 items

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