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13_2_20cm_2_scaffold_1720

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1720_1
unknown

Not on your lists

3..341
DNA (339bp) protein (113aa)

This feature has no annotations

13_2_20cm_2_scaffold_1720_trna_1
unknown

Not on your lists

comp(373..446)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_1720_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(516..818)
DNA (303bp) protein (101aa)
Septum formation initiator
Septum formation initiator Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_1720_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(815..1429)
DNA (615bp) protein (205aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
Enolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=ENO_KORVE
eno; phosphopyruvate hydratase
13_2_20cm_2_scaffold_1720_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1429..2016)
DNA (588bp) protein (196aa)
eno; enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enolase n=1 Tax=Desmospora sp. 8437 RepID=F5SGJ0_9BACL
Enolase
13_2_20cm_2_scaffold_1720_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2028..2768)
DNA (741bp) protein (247aa)
acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RBG_16_Gemmatimonadetes_66_8_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGR9_DESAR
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_2_20cm_2_scaffold_1720_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2765..3730)
DNA (966bp) protein (322aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Thiamine-monophosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Y1_GEMAT
thiamine-monophosphate kinase
13_2_20cm_2_scaffold_1720_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3727..5346)
DNA (1620bp) protein (540aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_1720_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5343..6866)
DNA (1524bp) protein (508aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEM1_ANASK
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD(P)H-hydrate epimerase
13_2_20cm_2_scaffold_1720_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6863..7693)
DNA (831bp) protein (277aa)
hypothetical protein; K06990 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Putative uncharacterized protein id=4042392 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
13_2_20cm_2_scaffold_1720_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7705..7902)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium HF0130_06E03 RepID=E0XSX5_9BACT id=5225635 bin=16ft_combo_ws3_JS1 species=uncultured bacterium HF0130_06E03 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_1720_11
bacterium UASB270, Bacteria

Not on your lists

comp(8053..10584)
DNA (2532bp) protein (844aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=7200705 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53)
13_2_20cm_2_scaffold_1720_12
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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comp(10585..11073)
DNA (489bp) protein (163aa)
Hsp20/alpha crystallin family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFT2_9BACT
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Zixibacteria_40_9_curated
heat shock protein Hsp20
13_2_20cm_2_scaffold_1720_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11063..12358)
DNA (1296bp) protein (432aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=GLYA_ANASK
13_2_20cm_2_scaffold_1720_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12355..12822)
DNA (468bp) protein (156aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Putative ribose 5-phosphate isomerase B n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L7Q2_SAPGL
13_2_20cm_2_scaffold_1720_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12785..13882)
DNA (1098bp) protein (366aa)
Leucine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X5_GEMAT
Glu/Leu/Phe/Val dehydrogenase
Glu/Leu/Phe/Val dehydrogenase {ECO:0000313|EMBL:AHG90541.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_1720_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13884..15029)
DNA (1146bp) protein (382aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_2_scaffold_1720_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15013..15846)
DNA (834bp) protein (278aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X3_GEMAT
13_2_20cm_2_scaffold_1720_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15887..16450)
DNA (564bp) protein (188aa)
Putative BioY protein putative membrane protein n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CXZ0_DEIDV
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
BioY protein
13_2_20cm_2_scaffold_1720_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16450..17637)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
13_2_20cm_2_scaffold_1720_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17649..18065)
DNA (417bp) protein (139aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W7_GEMAT
Displaying 21 items

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