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13_2_20cm_2_scaffold_1745

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1745_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..2170
DNA (2169bp) protein (723aa)
Glr1418 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKQ9_GLOVI
permease
Permease {ECO:0000313|EMBL:AHG89565.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_1745_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2265..3626
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YY3_SOLUE
sigma-54 dependent DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
sigma-54 factor interaction domain-containing protein
13_2_20cm_2_scaffold_1745_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3616..4959
DNA (1344bp) protein (448aa)
Putative sensory box histidine kinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWQ2_CORCM
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ntrY; putative sensory box histidine kinase
13_2_20cm_2_scaffold_1745_4
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4818..5828)
DNA (1011bp) protein (337aa)
Fatty acid desaturase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YCN0_9BRAD
Fatty acid desaturase {ECO:0000313|EMBL:EHR01210.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. W
fatty acid desaturase
13_2_20cm_2_scaffold_1745_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(6361..7860)
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFQ7_ANAD2 id=5223517 bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_2_20cm_2_scaffold_1745_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8015..8599
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68120.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_2_scaffold_1745_7
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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8559..8789
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT
hypothetical protein Tax=RBG_16_Zixibacteria_50_21_curated
hypothetical protein
13_2_20cm_2_scaffold_1745_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8901..9533
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
LuxR family transcriptional regulator
13_2_20cm_2_scaffold_1745_9
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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9640..10563
DNA (924bp) protein (308aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E142_9GAMM
response regulator receiver protein Tax=CG_Delta_03
response regulator/ggdef domain-containing protein
13_2_20cm_2_scaffold_1745_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(10629..11843)
DNA (1215bp) protein (405aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8N0_SINAD
56kDa selenium binding protein (SBP56)
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:AGA24986.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
13_2_20cm_2_scaffold_1745_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11960..12883)
DNA (924bp) protein (308aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT id=5223515 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative proline dehydrogenase
13_2_20cm_2_scaffold_1745_12
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(13122..13598)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82PQ5_STRAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC68527.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATC
13_2_20cm_2_scaffold_1745_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(13854..14732)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA91_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_1745_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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14893..16482
DNA (1590bp) protein (530aa)
hypothetical protein id=14425464 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein
13_2_20cm_2_scaffold_1745_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16385..17032)
DNA (648bp) protein (216aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4N5_ANATU
fumarylacetoacetate hydrolase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
fumarylacetoacetate (FAA) hydrolase
13_2_20cm_2_scaffold_1745_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17195..17752
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Elongation factor P
13_2_20cm_2_scaffold_1745_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17862..18380
DNA (519bp) protein (173aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:ABG05591.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABG05591.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacter
Aminotransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN7_RUBXD
13_2_20cm_2_scaffold_1745_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18358..18942
DNA (585bp) protein (195aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1)
Aspartate aminotransferase (Transaminase a) (Aspat) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3T8_THERP
13_2_20cm_2_scaffold_1745_19
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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19117..20376
DNA (1260bp) protein (420aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_2_20cm_2_scaffold_1745_20
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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20394..20669
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF5_ANASK
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ACG74791.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
13_2_20cm_2_scaffold_1745_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20682..21530)
DNA (849bp) protein (283aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VWX4_9CYAN
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM65852.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
13_2_20cm_2_scaffold_1745_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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21632..22600
DNA (969bp) protein (323aa)
qor; quinone oxidoreductase (EC:1.6.5.5) Tax=GWA2_Rokubacteria_73_35_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alcohol dehydrogenase zinc-binding domain protein
13_2_20cm_2_scaffold_1745_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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22622..23338
DNA (717bp) protein (239aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y47_SOLUE
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD family hydrolase
13_2_20cm_2_scaffold_1745_24
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23371..24660)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_31B05 RepID=E7C5Y0_9BACT
hypothetical protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
hypothetical protein
13_2_20cm_2_scaffold_1745_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24683..26755)
DNA (2073bp) protein (691aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY8_RHOM4
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACY47773.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
13_2_20cm_2_scaffold_1745_26
unknown

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comp(26789..27016)
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_2_scaffold_1745_27
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27238..28368
DNA (1131bp) protein (377aa)
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (EC:4.1.1.39)
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit {ECO:0000313|EMBL:ABI56517.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ABI56517.1};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobact
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9H0_ALKEH
13_2_20cm_2_scaffold_1745_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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28361..28765
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMZ5_9GAMM
cupin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin
13_2_20cm_2_scaffold_1745_29
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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28762..30126
DNA (1365bp) protein (455aa)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
succinate-semialdehyde dehydrogenase
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AJF06179.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="
13_2_20cm_2_scaffold_1745_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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30123..30824
DNA (702bp) protein (234aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4930082 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying items 1-30 of 38 in total

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