ggKbase home page

13_2_20cm_2_scaffold_1815

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1815_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..584
DNA (582bp) protein (194aa)
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
13_2_20cm_2_scaffold_1815_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

590..1786
DNA (1197bp) protein (399aa)
ATPase n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47TH6_THEFY
AAA ATPase central domain protein
AAA ATPase central domain protein {ECO:0000313|EMBL:AHG91368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_1815_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1783..3012
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_1815_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


3065..4300
DNA (1236bp) protein (412aa)
Signal recognition particle protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY3_GEMAT
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmati
13_2_20cm_2_scaffold_1815_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


4305..4562
DNA (258bp) protein (86aa)
30S ribosomal protein S16 n=1 Tax=Caloramator australicus RC3 RepID=G0V3Z5_9CLOT
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S16
13_2_20cm_2_scaffold_1815_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4601..4831
DNA (231bp) protein (77aa)
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_1815_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4818..5363
DNA (546bp) protein (182aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW8_GEMAT
tRNA (guanine-N(1)-)-methyltransferase
13_2_20cm_2_scaffold_1815_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


5368..5745
DNA (378bp) protein (126aa)
50S ribosomal protein L19 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPA9_KYRT2
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
50S ribosomal protein L19
13_2_20cm_2_scaffold_1815_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5742..6386
DNA (645bp) protein (215aa)
Ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7S7_SPHTD
13_2_20cm_2_scaffold_1815_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6361..8091)
DNA (1731bp) protein (577aa)
DNA polymerase X family/PHP domain-containing protein (EC:2.7.7.7)
DNA Polymerase X family n=6 Tax=Coxiella burnetii RepID=A9KEA4_COXBN rbh
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_1815_11

Not on your lists

8230..11325
DNA (3096bp) protein (1032aa)
TonB-dependent receptor n=1 Tax=bacterium symbiont of Plakortis simplex pPS11G3 RepID=V5JB93_9BACT rbh
TonB-dependent receptor {ECO:0000313|EMBL:AGH13559.1}; TaxID=1256902 species="Bacteria.;" source="bacterium symbiont of Plakortis simplex pPS11G3.;"
hypothetical protein
13_2_20cm_2_scaffold_1815_12
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11395..12231)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJW3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84975.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_2_20cm_2_scaffold_1815_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12290..13153)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D2514
methyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
methyltransferase
13_2_20cm_2_scaffold_1815_14
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13213..13986
DNA (774bp) protein (258aa)
putative glycosyltransferase (EC:2.4.-.-)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
Conserved hypothtical protein id=4984275 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
13_2_20cm_2_scaffold_1815_15
Acidaminococcus sp. CAG:542, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13979..14827
DNA (849bp) protein (283aa)
YdjC family protein n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7LXW1_9FIRM
YdjC family protein {ECO:0000313|EMBL:CDE92936.1}; TaxID=1262687 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Ac
hypothetical protein
13_2_20cm_2_scaffold_1815_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14740..15789)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6K8_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49851.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
13_2_20cm_2_scaffold_1815_17
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15798..17693)
DNA (1896bp) protein (632aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=mine drainage metagenome RepID=T1CBY4_9ZZZZ
peptidase S9 prolyl oligopeptidase Tax=RBG_16_Ignavibacteria_34_14_curated
WD40-like beta Propeller containing protein
13_2_20cm_2_scaffold_1815_18
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18035..18829
DNA (795bp) protein (265aa)
ABC-2 type transporter superfamily n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WG92_9SYNE
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
polysaccharide/polyol phosphate ABC transporter permease
13_2_20cm_2_scaffold_1815_19
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18832..20775
DNA (1944bp) protein (648aa)
ABC transporter related n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K6R6_CYAP7
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACK72615.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synec
13_2_20cm_2_scaffold_1815_20
unknown

Not on your lists

20815..21207
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying 20 items

View Taxonomy