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13_2_20cm_2_scaffold_19544

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_19544_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..562
DNA (561bp) protein (187aa)
radical SAM protein Tax=GWA2_Rokubacteria_73_35_curated
Fe-S protein, radical SAM family id=3818235 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM protein
13_2_20cm_2_scaffold_19544_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

576..944
DNA (369bp) protein (123aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=2224623 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_19544_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

941..1618
DNA (678bp) protein (226aa)
nucleoside phosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2224624 bin=GWA2_Methylomirabilis_73_35 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_19544_4
unknown

Not on your lists

comp(1511..1933)
DNA (423bp) protein (141aa)
MYLK3; myosin light chain kinase 3
13_2_20cm_2_scaffold_19544_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1986..3005
DNA (1020bp) protein (340aa)
hopanoid-associated sugar epimerase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] id=14625619 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hopanoid-associated sugar epimerase
13_2_20cm_2_scaffold_19544_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3002..3889
DNA (888bp) protein (296aa)
squalene/phytoene synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
squalene/phytoene synthase id=14625618 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
squalene/phytoene synthase
13_2_20cm_2_scaffold_19544_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3733..4266)
DNA (534bp) protein (178aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_2_20cm_2_scaffold_19544_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4463..4780
DNA (318bp) protein (106aa)
alcohol dehydrogenase (EC:1.1.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alcohol dehydrogenase (EC:1.1.1.1)
Putative alcohol dehydrogenase id=4350134 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_2_scaffold_19544_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4789..5223
DNA (435bp) protein (145aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) id=14625616 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
theronine dehydrogenase-like Zn-dependent dehydrogenase
13_2_20cm_2_scaffold_19544_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5187..5642
DNA (456bp) protein (152aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) id=14625616 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
dehydrogenase
13_2_20cm_2_scaffold_19544_11
unknown

Not on your lists

comp(5661..5939)
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_2_scaffold_19544_12
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6641..7618)
DNA (978bp) protein (326aa)
Alr3897 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YQD6_NOSS1
hypothetical protein
Alr3897 protein {ECO:0000313|EMBL:BAB75596.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
13_2_20cm_2_scaffold_19544_13
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7720..10287
DNA (2568bp) protein (856aa)
4-phytase (EC:3.1.3.26) Tax=CG_Delta_06
Bacterial transcriptional activator domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ00_9BACT
transcriptional activator domain-containing protein
13_2_20cm_2_scaffold_19544_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10256..10933
DNA (678bp) protein (226aa)
guanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 id=4895065 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate cyclase
13_2_20cm_2_scaffold_19544_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10950..12095
DNA (1146bp) protein (382aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
thrC; threonine synthase (EC:4.2.3.1)
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_19544_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12803..14137
DNA (1335bp) protein (445aa)
fusA; elongation factor G Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Elongation factor G id=3662439 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation elongation factor G
13_2_20cm_2_scaffold_19544_17
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

14552..15460
DNA (909bp) protein (303aa)
Metallo-beta-lactamase family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4X0_THERP
metallo-beta-lactamase family protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27
13_2_20cm_2_scaffold_19544_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15937..16509
DNA (573bp) protein (191aa)
hypothetical protein; K07112 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3662437 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_19544_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16543..17799
DNA (1257bp) protein (419aa)
fccB; sulfide dehydrogenase flavoprotein subunit (EC:1.8.2.-)
soxF; sulfide dehydrogenase (flavocytochrome), flavoprotein subunit id=14625587 bin=bin7_NC10_sister species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
soxF; sulfide dehydrogenase (flavocytochrome), flavoprotein subunit Tax=CSP1_6_Rokubacteria
13_2_20cm_2_scaffold_19544_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17868..18329
DNA (462bp) protein (154aa)
cytochrome c class I Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cytochrome c id=3662435 bin=GWA2_Methylomirabilis_73_35 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cytochrome c
13_2_20cm_2_scaffold_19544_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18352..19221
DNA (870bp) protein (290aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3662434 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_19544_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19223..20485
DNA (1263bp) protein (421aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B5_THERP
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4Fe-4S ferredoxin
Displaying 22 items

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