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13_2_20cm_2_scaffold_2132

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2132_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1..339)
DNA (339bp) protein (113aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TSAD_GEMAT
O-sialoglycoprotein endopeptidase
13_2_20cm_2_scaffold_2132_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(332..1267)
DNA (936bp) protein (312aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_2132_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1251..1793)
DNA (543bp) protein (181aa)
Thiol-disulfide oxidoreductase ResA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A602_GEMAT
resA; thiol-disulfide oxidoreductase ResA Tax=GWC2_Gemmatimonadetes_71_10_curated
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_2_20cm_2_scaffold_2132_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1790..2476)
DNA (687bp) protein (229aa)
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribulose-phosphate 3-epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A603_GEMAT
ribulose-phosphate 3-epimerase
13_2_20cm_2_scaffold_2132_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2476..3246)
DNA (771bp) protein (257aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein kinase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WD07_KINRD
protein kinase
13_2_20cm_2_scaffold_2132_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3246..3800)
DNA (555bp) protein (185aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadet
Putative rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A605_GEMAT
sun protein
13_2_20cm_2_scaffold_2132_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3962..4360)
DNA (399bp) protein (133aa)
putative rRNA methyltransferase (EC:2.1.1.-); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative rRNA methyltransferase (EC:2.1.1.-)
Putative rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A605_GEMAT
13_2_20cm_2_scaffold_2132_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4389..5186)
DNA (798bp) protein (266aa)
thiG; thiazole biosynthesis protein thiG Tax=RBG_16_Gemmatimonadetes_66_8_curated
Thiazole synthase id=3894134 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
thiG; thiazole biosynthesis protein thiG
13_2_20cm_2_scaffold_2132_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5192..5404)
DNA (213bp) protein (71aa)
Thiazole synthase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4D4_9SPHN
thiamine biosynthesis protein ThiS Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thiG; Thiazole biosynthesis protein thiG
13_2_20cm_2_scaffold_2132_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5401..6027)
DNA (627bp) protein (209aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3W1_SPHTD
13_2_20cm_2_scaffold_2132_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6024..6947)
DNA (924bp) protein (308aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Methionyl-tRNA formyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A606_GEMAT rbh
Methionyl-tRNA formyltransferase
13_2_20cm_2_scaffold_2132_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6948..7496)
DNA (549bp) protein (183aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
def; peptide deformylase Def (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WYF5_RHIFR
13_2_20cm_2_scaffold_2132_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7493..7828)
DNA (336bp) protein (112aa)
preprotein translocase subunit YajC n=1 Tax=Ponticaulis koreensis RepID=UPI0003B582A4
yajC; preprotein translocase YajC subunit; K03210 preprotein translocase subunit YajC Tax=RBG_16_Gemmatimonadetes_66_8_curated
yajC; preprotein translocase YajC subunit
13_2_20cm_2_scaffold_2132_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7825..9021)
DNA (1197bp) protein (399aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Queuine tRNA-ribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A609_GEMAT
Queuine tRNA-ribosyltransferase
13_2_20cm_2_scaffold_2132_15
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9014..9910)
DNA (897bp) protein (299aa)
NADH-ubiquinone oxidoreductase n=1 Tax=Agromyces subbeticus RepID=UPI0003B35C4E
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KJC65194.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
nucleoside-diphosphate-sugar epimerase
13_2_20cm_2_scaffold_2132_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9910..10935)
DNA (1026bp) protein (342aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) PF0_DESK7">RepID=F6CPF0_DESK7
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
13_2_20cm_2_scaffold_2132_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11019..12059)
DNA (1041bp) protein (347aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RUVB_GEMAT
Holliday junction ATP-dependent DNA helicase ruvB
13_2_20cm_2_scaffold_2132_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12056..12235)
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_2132_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12238..12816)
DNA (579bp) protein (193aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036780A7
Holliday junction ATP-dependent DNA helicase ruvA
13_2_20cm_2_scaffold_2132_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13219..13968)
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein GAU_0635 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y635_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UPF0082 protein yeeN
13_2_20cm_2_scaffold_2132_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13987..14877)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A618_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_2132_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14913..15290)
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_2132_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15287..16282)
DNA (996bp) protein (332aa)
Glycosyl transferase family 9 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV96_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW99321.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glycosyl transferase family protein
13_2_20cm_2_scaffold_2132_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16341..16559
DNA (219bp) protein (73aa)
Putative response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A620_GEMAT
putative response regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative response regulator
Displaying 24 items

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