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13_2_20cm_2_scaffold_2185

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2185_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..567
DNA (567bp) protein (189aa)
methylthioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methylthioadenosine phosphorylase (EC:2.4.2.28)
Phosphorylase family 2 protein id=2807805 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
13_2_20cm_2_scaffold_2185_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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564..1820
DNA (1257bp) protein (419aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] Tax=RBG_16_Euryarchaeota_67_27_curated
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=uncultured archaeon GZfos9E5 RepID=Q647P9_9ARCH rbh
13_2_20cm_2_scaffold_2185_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1820..2383
DNA (564bp) protein (188aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380F25E
adenine phosphoribosyltransferase
13_2_20cm_2_scaffold_2185_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2773..3183)
DNA (411bp) protein (137aa)
Putative transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9T6_9EURY
putative transcriptional regulator Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative transcriptional regulator
13_2_20cm_2_scaffold_2185_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3309..3653)
DNA (345bp) protein (115aa)
Putative transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9T6_9EURY
putative transcriptional regulator Tax=RBG_16_Euryarchaeota_67_27_curated
putative transcriptional regulator
13_2_20cm_2_scaffold_2185_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3760..5259)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036FC6DA
GvpD gas vesicle Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_2_20cm_2_scaffold_2185_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5315..6064)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML54_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69896.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_2_scaffold_2185_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6120..7706
DNA (1587bp) protein (529aa)
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
phP C-terminal domain-containing protein id=14631834 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
php domain protein
13_2_20cm_2_scaffold_2185_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7645..8304)
DNA (660bp) protein (220aa)
hypothetical protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Phage SPO1 DNA polymerase-related protein n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B698_ACIHW
phage SPO1 DNA polymerase-like protein
13_2_20cm_2_scaffold_2185_10
unknown

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comp(8345..8641)
DNA (297bp) protein (99aa)

This feature has no annotations

13_2_20cm_2_scaffold_2185_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8616..9086)
DNA (471bp) protein (157aa)
Heat shock protein Hsp20 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EHJ7_PYRF1
small heat shock protein Tax=RBG_16_Euryarchaeota_67_27_curated
small heat shock protein (hsp20-1)
13_2_20cm_2_scaffold_2185_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(9224..9637)
DNA (414bp) protein (138aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_2185_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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9664..10503
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003724D8B
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_2185_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10541..11221
DNA (681bp) protein (227aa)
RNA 2'-phosphotransferase, Tpt1 / KptA family protein n=2 Tax=mine drainage metagenome RepID=T1BL17_9ZZZZ
RNA 2'-phosphotransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RNA 2'-phosphotransferase
13_2_20cm_2_scaffold_2185_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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11302..12036
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMJ7_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_2185_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(12037..13041)
DNA (1005bp) protein (335aa)
calcium-sodium antiporter; K07301 inner membrane protein Tax=RBG_16_Euryarchaeota_67_27_curated
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein id=5084639 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
sodium:calcium antiporter
13_2_20cm_2_scaffold_2185_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(13133..14290)
DNA (1158bp) protein (386aa)
purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVX2_METHD rbh
ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligase)
13_2_20cm_2_scaffold_2185_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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14547..15800
DNA (1254bp) protein (418aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
FAD dependent oxidoreductase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHD2_HALO1
FAD dependent oxidoreductase
13_2_20cm_2_scaffold_2185_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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15749..15991
DNA (243bp) protein (81aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RBG_16_Euryarchaeota_67_27_curated
FAD dependent oxidoreductase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHD2_HALO1
FAD dependent oxidoreductase
13_2_20cm_2_scaffold_2185_trna_1
unknown

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comp(16187..16311)
DNA (125bp)
transferRNA
Displaying 20 items

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