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13_2_20cm_2_scaffold_2255

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2255_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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1..1395
DNA (1395bp) protein (465aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Succinate dehydrogenase (EC:1.3.99.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000363DC19
13_2_20cm_2_scaffold_2255_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

1398..2147
DNA (750bp) protein (250aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003651092
fumarate reductase iron-sulfur subunit
13_2_20cm_2_scaffold_2255_3

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2178..2681
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000377C0C3
Uncharacterized protein {ECO:0000313|EMBL:AHN97960.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hypothetical protein
13_2_20cm_2_scaffold_2255_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2837..4735
DNA (1899bp) protein (633aa)
Arsenite efflux ATP-binding protein ArsA {ECO:0000313|EMBL:ABF41411.1}; EC=3.6.3.16 {ECO:0000313|EMBL:ABF41411.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
Arsenite efflux ATP-binding protein ArsA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INY9_KORVE rbh
arsenite-transporting ATPase
13_2_20cm_2_scaffold_2255_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4720..5487
DNA (768bp) protein (256aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ0_KORVE
gas vesicle synthesis GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41410.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_2_scaffold_2255_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5524..5784
DNA (261bp) protein (87aa)
Gas vesicle protein GVPa n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ1_KORVE
gas vesicle protein GvpA
Gas vesicle protein GVPa {ECO:0000313|EMBL:ABF41409.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_2_20cm_2_scaffold_2255_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5784..6437
DNA (654bp) protein (218aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ2_KORVE
gas vesicle synthesis GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41408.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_2_scaffold_2255_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6437..6781
DNA (345bp) protein (115aa)
Gas vesicle K n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ3_KORVE
gas vesicle K
Gas vesicle K {ECO:0000313|EMBL:ABF41407.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_2_20cm_2_scaffold_2255_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6967..7266
DNA (300bp) protein (100aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ4_KORVE
gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_2_20cm_2_scaffold_2255_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7292..7594
DNA (303bp) protein (101aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000255|HAMAP-Rule:MF_00576}; Short=GVP {ECO:0000255|HAMAP-Rule:MF_00576};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
13_2_20cm_2_scaffold_2255_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7626..9755
DNA (2130bp) protein (710aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ6_KORVE rbh
PAS/PAC sensor signal transduction histidine kinase
13_2_20cm_2_scaffold_2255_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9805..10677
DNA (873bp) protein (291aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ8_KORVE
gas vesicle synthesis GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ABF41402.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_2_scaffold_2255_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10702..10968
DNA (267bp) protein (89aa)
Gas vesicle G n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5D6_GEOUR
gas vesicle protein G Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gas vesicle protein G
13_2_20cm_2_scaffold_2255_14
unknown

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11022..11222
DNA (201bp) protein (67aa)

This feature has no annotations

13_2_20cm_2_scaffold_2255_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11246..12049)
DNA (804bp) protein (268aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK9_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF43291.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_2_20cm_2_scaffold_2255_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

12471..13463
DNA (993bp) protein (331aa)
putative sensor histidine kinase (EC:2.7.13.3)
Putative Sonsor histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBU0_9BACT
PAS domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_2_20cm_2_scaffold_2255_17
unknown

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comp(13542..13865)
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_2_scaffold_2255_18
unknown

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comp(13974..14393)
DNA (420bp) protein (140aa)

This feature has no annotations

13_2_20cm_2_scaffold_2255_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14390..14791)
DNA (402bp) protein (134aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC0_9BACT
sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CBK40879.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira
13_2_20cm_2_scaffold_2255_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14962..15369
DNA (408bp) protein (136aa)
Response regulator receiver protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INZ7_KORVE
Fis family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
response regulator receiver protein
13_2_20cm_2_scaffold_2255_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15457..15999
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YI1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85284.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_2_scaffold_2255_22
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16073..16315
DNA (243bp) protein (81aa)
hypothetical protein id=14623047 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
hypothetical protein
13_2_20cm_2_scaffold_2255_23
unknown

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16368..16646
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_2_scaffold_2255_24
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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16707..17483
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DDU9_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF90714.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_2_20cm_2_scaffold_2255_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17790..19040)
DNA (1251bp) protein (417aa)
Beta-ketoacyl synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP29_KORVE
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:ABF41371.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_2_20cm_2_scaffold_2255_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19301..20893
DNA (1593bp) protein (531aa)
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABF40968.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABF40968.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ82_KORVE
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
13_2_20cm_2_scaffold_2255_27

Not on your lists

20973..21683
DNA (711bp) protein (237aa)
Aspartate racemase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KCP7_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:KKK81402.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aspartate racemase
13_2_20cm_2_scaffold_2255_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21794..25051
DNA (3258bp) protein (1086aa)
Serine/threonine protein kinase with TPR repeats n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIA4_KORVE
Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:ABF43396.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
serine/threonin protein kinase
13_2_20cm_2_scaffold_2255_29
unknown

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comp(25158..25706)
DNA (549bp) protein (183aa)

This feature has no annotations

13_2_20cm_2_scaffold_2255_30
unknown

Not on your lists

26634..26828
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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