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13_2_20cm_2_scaffold_2258

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2258_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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178..399
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_2258_2
unknown

Not on your lists

409..1308
DNA (900bp) protein (300aa)

This feature has no annotations

13_2_20cm_2_scaffold_2258_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1308..2180
DNA (873bp) protein (291aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_2258_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2177..3520)
DNA (1344bp) protein (448aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88134.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_2258_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3747..4481
DNA (735bp) protein (245aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] id=12555739 bin=CNBR_ACIDO species=unknown genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
13_2_20cm_2_scaffold_2258_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4384..5490)
DNA (1107bp) protein (369aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
13_2_20cm_2_scaffold_2258_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5731..7122)
DNA (1392bp) protein (464aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dnaA; chromosomal replication initiator protein DnaA
13_2_20cm_2_scaffold_2258_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


7249..7410
DNA (162bp) protein (54aa)
Ribosomal protein L34 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmH; 50S ribosomal protein L34
13_2_20cm_2_scaffold_2258_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7434..7748
DNA (315bp) protein (105aa)
Ribonuclease P protein component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP9_GEMAT
Ribonuclease P protein component Tax=GWC2_Gemmatimonadetes_71_10_curated
Ribonuclease P protein component
13_2_20cm_2_scaffold_2258_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7745..7972
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=YIDD_SYNJA
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_2258_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8019..9575
DNA (1557bp) protein (519aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Membrane protein oxaA
13_2_20cm_2_scaffold_2258_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9598..10542
DNA (945bp) protein (315aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_2_20cm_2_scaffold_2258_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10539..10835
DNA (297bp) protein (99aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA modification GTPase MnmE C-terminal domain protein
tRNA modification GTPase MnmE id=1791622 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
13_2_20cm_2_scaffold_2258_14
RLO_PLX_64_10, Bacteria

Not on your lists

10924..11847
DNA (924bp) protein (308aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_2_20cm_2_scaffold_2258_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11847..12389
DNA (543bp) protein (181aa)
hypothetical protein id=14429046 bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
13_2_20cm_2_scaffold_2258_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12420..13394)
DNA (975bp) protein (325aa)
YVTN beta-propeller repeat-containing protein id=14429063 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
YVTN beta-propeller repeat-containing protein Tax=CSP1_5_NC10
40-residue YVTN family beta-propeller repeat-containing protein
13_2_20cm_2_scaffold_2258_17
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13408..13935)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAB6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB47372.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
13_2_20cm_2_scaffold_2258_18
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13932..15257)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000367365C
methanol oxidation protein
Putative periplasmic binding protein, involved in methanol oxidation {ECO:0000313|EMBL:CCJ08486.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae;
13_2_20cm_2_scaffold_2258_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15398..17161)
DNA (1764bp) protein (588aa)
methanol dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003635EFE
Methanol dehydrogenase {ECO:0000313|EMBL:KGM31741.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosu
putative methanol dehydrogenase MoxF
13_2_20cm_2_scaffold_2258_20
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17437..18282)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003631991
Beta-ribofuranosylaminobenzene 5'-phosphate synthase
Beta-ribofuranosylaminobenzene 5'-phosphate synthase {ECO:0000313|EMBL:AIQ88437.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacter
13_2_20cm_2_scaffold_2258_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(18279..18854)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67547.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_2_scaffold_2258_22
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18851..19513)
DNA (663bp) protein (221aa)
trpG; anthranilate synthase, component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003618C1B
glutamine amidotransferase of anthranilate synthase
13_2_20cm_2_scaffold_2258_23
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19510..20994)
DNA (1485bp) protein (495aa)
Anthranilate synthase component 1 {ECO:0000313|EMBL:EQB29047.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EQB29047.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellacea
para-aminobenzoate synthase subunit I (EC:4.1.3.27)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E6109E
13_2_20cm_2_scaffold_2258_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(20991..22430)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67548.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_2_20cm_2_scaffold_2258_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(22427..22726)
DNA (300bp) protein (100aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomira
Transcriptional coactivator/pterin dehydratase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA0_9BACT
transcriptional coactivator/pterin dehydratase
Displaying 25 items

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