ggKbase home page

13_2_20cm_2_scaffold_2543

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2543_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

197..1219
DNA (1023bp) protein (341aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI0003660A98
13_2_20cm_2_scaffold_2543_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1220..1819
DNA (600bp) protein (200aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZD3_DICTD
transferase hexapeptide repeat containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transferase hexapeptide repeat containing protein
13_2_20cm_2_scaffold_2543_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1846..2961
DNA (1116bp) protein (372aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I2_GEMAT
aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
DegT/DnrJ/EryC1/StrS aminotransferase
13_2_20cm_2_scaffold_2543_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2958..3644
DNA (687bp) protein (229aa)
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
oxidoreductase id=24532286 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
13_2_20cm_2_scaffold_2543_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3877..5196
DNA (1320bp) protein (440aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W5_GEMAT
nucleotide-sugar dehydrogenase Tax=GWC2_Gemmatimonadetes_71_10_curated
nucleotide sugar dehydrogenase
13_2_20cm_2_scaffold_2543_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5193..6512
DNA (1320bp) protein (440aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C4K0_9BACT
nucleotide sugar dehydrogenase
13_2_20cm_2_scaffold_2543_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6497..7432
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRU8_ROSCS
NAD-dependent epimerase/dehydratase
13_2_20cm_2_scaffold_2543_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7429..8397
DNA (969bp) protein (323aa)
NAD-dependent epimerase/dehydratase id=14623553 bin=bin5_DeltaP species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase Tax=RBG_16_Nitrospirae_64_22_curated
NAD-dependent epimerase/dehydratase
13_2_20cm_2_scaffold_2543_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8381..9172
DNA (792bp) protein (264aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative TPR domain protein id=3894488 bin=GWC2_Proteo_65_14_Ab886 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
13_2_20cm_2_scaffold_2543_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9169..10083
DNA (915bp) protein (305aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_2543_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10089..10838
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I0_GEMAT
hypothetical protein; K05807 putative lipoprotein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_2543_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10845..11285
DNA (441bp) protein (147aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX75_SOLCM
nicotinate/nicotinamide nucleotide adenylyltransferase
13_2_20cm_2_scaffold_2543_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11293..14466
DNA (3174bp) protein (1058aa)
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA id=7201386 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Protein translocase subunit secA
13_2_20cm_2_scaffold_2543_14
unknown

Not on your lists

comp(14531..15199)
DNA (669bp) protein (223aa)

This feature has no annotations

13_2_20cm_2_scaffold_2543_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15409..16092
DNA (684bp) protein (228aa)
DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H3_GEMAT
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RadC
13_2_20cm_2_scaffold_2543_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16233..18416
DNA (2184bp) protein (728aa)
GTP pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT
RelA/SpoT family protein
RelA/SpoT family protein {ECO:0000313|EMBL:AHG91100.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_2543_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18426..20456
DNA (2031bp) protein (677aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
uvrB; UvrABC system protein B
UvrABC system protein B {ECO:0000255|HAMAP-Rule:MF_00204}; Short=Protein UvrB {ECO:0000255|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000255|HAMAP-Rule:MF_00204}; TaxID=379066 species="Ba
13_2_20cm_2_scaffold_2543_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20419..20697
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G9_GEMAT
putative protein family UPF0079, ATPase
Uncharacterized protein {ECO:0000313|EMBL:AHG91097.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_2543_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20726..21460
DNA (735bp) protein (245aa)
Peptidase M22 glycoprotease n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ1_RHOM4
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M22 glycoprotease
13_2_20cm_2_scaffold_2543_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21492..21890
DNA (399bp) protein (133aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZP2_9FIRM
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AHG91095.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 20 items

View Taxonomy