ggKbase home page

13_2_20cm_2_scaffold_2572

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2572_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB8_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_2_20cm_2_scaffold_2572_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(506..1429)
DNA (924bp) protein (308aa)
Cytochrome b/b6, N-terminal domain n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB7_SOLUE
cytochrome b/b6 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
cytochrome b/b6 domain-containing protein
13_2_20cm_2_scaffold_2572_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1441..2589)
DNA (1149bp) protein (383aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB6_SOLUE
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABJ85349.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter
13_2_20cm_2_scaffold_2572_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2617..3633)
DNA (1017bp) protein (339aa)
ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Ferrochelatase id=3410466 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome rbh
hemH; ferrochelatase
13_2_20cm_2_scaffold_2572_5
unknown

Not on your lists

comp(3715..3921)
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_2_scaffold_2572_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3959..5002)
DNA (1044bp) protein (348aa)
Isocitrate dehydrogenase (NAD+) {ECO:0000313|EMBL:ABF43042.1}; EC=1.1.1.41 {ECO:0000313|EMBL:ABF43042.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatu
Isocitrate dehydrogenase (NAD+) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJA8_KORVE
isocitrate dehydrogenase (NAD+)
13_2_20cm_2_scaffold_2572_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5027..5521)
DNA (495bp) protein (165aa)
Transcriptional repressor NrdR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NRDR_KORVE
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
13_2_20cm_2_scaffold_2572_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5629..6633)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB2_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43038.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_2_scaffold_2572_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6605..7375)
DNA (771bp) protein (257aa)
Lytic transglycosylase, catalytic n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB3_KORVE
lytic transglycosylase, catalytic
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABF43037.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
13_2_20cm_2_scaffold_2572_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7416..8366)
DNA (951bp) protein (317aa)
Cof protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB4_KORVE
Cof protein
Cof protein {ECO:0000313|EMBL:ABF43036.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_2_scaffold_2572_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8395..9132
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003601E6F
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABF43035.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ell
13_2_20cm_2_scaffold_2572_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9208..10416
DNA (1209bp) protein (403aa)
L-threonine synthase {ECO:0000313|EMBL:ABF43034.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ABF43034.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter
L-threonine synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB6_KORVE rbh
threonine synthase
13_2_20cm_2_scaffold_2572_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10504..11856
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; C
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB8_KORVE rbh
sensor signal transduction histidine kinase rbh
13_2_20cm_2_scaffold_2572_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11826..12968)
DNA (1143bp) protein (381aa)
Glycosyl transferase, group 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB9_KORVE rbh
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABF43031.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_2_scaffold_2572_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13062..13709)
DNA (648bp) protein (216aa)
Type IV pilus assembly PilZ n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILL5_KORVE
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ABF42235.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_2_20cm_2_scaffold_2572_16
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13863..14543)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZF02_TERRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL87820.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 /
13_2_20cm_2_scaffold_2572_trna_1
unknown

Not on your lists

14906..14979
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_2572_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15264..15659
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C192E
Hemin transporter {ECO:0000313|EMBL:ETW93292.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glbO; 2-on-2 hemoglobin
13_2_20cm_2_scaffold_2572_18
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15721..16617
DNA (897bp) protein (299aa)
alkanal monooxygenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7726B rbh
luciferase-like
Luciferase-like {ECO:0000313|EMBL:ABE65067.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (str
Displaying 19 items

View Taxonomy