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13_2_20cm_2_scaffold_2588

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_2588_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..530)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G5_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_2588_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(588..1655)
DNA (1068bp) protein (356aa)
Glycine oxidase ThiO n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAZ7_MYXSD
glycine oxidase ThiO Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glycine oxidase ThiO
13_2_20cm_2_scaffold_2588_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1670..1894
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_2588_4
unknown

Not on your lists

comp(1891..2373)
DNA (483bp) protein (161aa)

This feature has no annotations

13_2_20cm_2_scaffold_2588_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2363..3325)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6D2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_2588_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3322..4863)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
glycosyl transferase family 2
13_2_20cm_2_scaffold_2588_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4875..5927)
DNA (1053bp) protein (351aa)
group 1 glycosyl transferase id=12556756 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
RfaG; glycosyltransferase
13_2_20cm_2_scaffold_2588_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5937..6515)
DNA (579bp) protein (193aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
PAS/PAC sensor hybrid histidine kinase id=4905361 bin=GWA2_Methylomirabilis_73_35 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor hybrid histidine kinase
13_2_20cm_2_scaffold_2588_9
unknown

Not on your lists

6686..6898
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_2_scaffold_2588_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7832..8539
DNA (708bp) protein (236aa)
Uncharacterized protein (Fragment) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNI8_9BACT
hypothetical protein
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_2588_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8541..8963)
DNA (423bp) protein (141aa)
Fis family transcriptional regulator n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5B0E0
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Fis family transcriptional regulator
13_2_20cm_2_scaffold_2588_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8960..9646)
DNA (687bp) protein (229aa)
peptidase C26; K07010 putative glutamine amidotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase C26 id=2304934 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted glutamine amidotransferases
13_2_20cm_2_scaffold_2588_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9643..10182)
DNA (540bp) protein (180aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_2588_14
unknown

Not on your lists

comp(10179..10634)
DNA (456bp) protein (152aa)

This feature has no annotations

13_2_20cm_2_scaffold_2588_15
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10644..12866)
DNA (2223bp) protein (741aa)
Iron complex outer membrane receptor protein; K02014 iron complex outermembrane recepter protein Tax=GWA2_Ignavibacteria_54_16_curated
Iron complex outer membrane receptor protein id=4897594 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
TonB-dependent receptor plug
13_2_20cm_2_scaffold_2588_16
unknown

Not on your lists

comp(12854..13375)
DNA (522bp) protein (174aa)

This feature has no annotations

13_2_20cm_2_scaffold_2588_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13626..14195
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D6_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_2588_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14298..14693
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWF6_RUBXD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_2588_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14693..14995
DNA (303bp) protein (101aa)
Amino acid/peptide transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C32_SOLUE
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amino acid/peptide transporter
Displaying 19 items

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