ggKbase home page

13_2_20cm_2_scaffold_264

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_264_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..126
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK35619.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
13_2_20cm_2_scaffold_264_2
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

324..2099
DNA (1776bp) protein (592aa)
Kelch repeat-containing protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S6P1_INTC7
kelch repeat-containing protein Tax=RBG_16_RIF_CHLX_69_14_curated
kelch repeat-containing protein
13_2_20cm_2_scaffold_264_3
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2332..3327)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Streptomyces purpureus RepID=UPI0003746022 rbh
NADPH:quinone reductase {ECO:0000313|EMBL:KJY18246.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
alcohol dehydrogenase zinc-binding domain-containing protein rbh
13_2_20cm_2_scaffold_264_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3327..3971)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B4E5_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ83631.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_2_20cm_2_scaffold_264_5
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4198..4911
DNA (714bp) protein (238aa)
Transcriptional regulator, TetR family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JS18_ARTS2 rbh
SPG23_c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28916.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
TetR family transcriptional regulator rbh
13_2_20cm_2_scaffold_264_6
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5134..5562)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003736C42
hypothetical protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
13_2_20cm_2_scaffold_264_7
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5559..6239)
DNA (681bp) protein (227aa)
WD40 domain protein beta Propeller n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:EGK87235.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus
WD40 domain-containing protein
13_2_20cm_2_scaffold_264_8
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6617..8890
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000382405E
Uncharacterized protein {ECO:0000313|EMBL:KGJ79420.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
Hypothetical protein
13_2_20cm_2_scaffold_264_9
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9256..10158)
DNA (903bp) protein (301aa)
Beta-lactamase domain protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BUY0_STRBB rbh
beta-lactamase rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:ADI05359.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (
13_2_20cm_2_scaffold_264_10
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10265..11155
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BUY1_STRBB rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:ADI05360.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
13_2_20cm_2_scaffold_264_11
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11207..12145)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000363F4CD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF70046.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
13_2_20cm_2_scaffold_264_12
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12352..15693
DNA (3342bp) protein (1114aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000372C3FF rbh
Transcriptional regulator, SARP family {ECO:0000313|EMBL:CEL15209.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporang
regulatory protein rbh
13_2_20cm_2_scaffold_264_13
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16036..16611
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003793DB6
Phosphotransferase {ECO:0000313|EMBL:KDN77348.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
13_2_20cm_2_scaffold_264_14
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16649..17347)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P5I0_STRVO rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEM84793.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger
13_2_20cm_2_scaffold_264_15
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17344..18354)
DNA (1011bp) protein (337aa)
Putative permease n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82EP6_STRAW rbh
hypothetical protein
Putative permease {ECO:0000313|EMBL:BAC72280.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 3126
13_2_20cm_2_scaffold_264_16
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18531..19520)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003776F94
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ41288.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
13_2_20cm_2_scaffold_264_17
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19640..20236)
DNA (597bp) protein (199aa)
Regulatory protein TetR n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I0T8_MYCRH
Regulatory protein TetR {ECO:0000313|EMBL:EHB56051.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
TetR family transcriptional regulator
13_2_20cm_2_scaffold_264_18
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20253..21206
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00036A886C
Putative oxidoreductase {ECO:0000313|EMBL:GAC70099.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
short-chain alcohol dehydrogenase like protein
13_2_20cm_2_scaffold_264_19
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21282..22133)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JJV8_STRRC rbh
Uncharacterized protein {ECO:0000313|EMBL:EST20008.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
hypothetical protein
13_2_20cm_2_scaffold_264_20
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22475..22837
DNA (363bp) protein (121aa)
membrane protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI0003751B22
Membrane protein {ECO:0000313|EMBL:KIA66691.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
membrane protein
13_2_20cm_2_scaffold_264_21
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23032..24342)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036DBC68 rbh
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" sour
NRAMP family Mn2+/Fe2+ transporter
13_2_20cm_2_scaffold_264_22
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24345..25559)
DNA (1215bp) protein (405aa)
molecular chaperone GroEL n=1 Tax=Actinoplanes globisporus RepID=UPI000369C4DF rbh
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonosp
groE; chaperonin GroEL
13_2_20cm_2_scaffold_264_23
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26071..27096)
DNA (1026bp) protein (342aa)
alcohol dehydrogenase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7A91E
Alcohol dehydrogenase {ECO:0000313|EMBL:EOD63907.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 4
adh; alcohol dehydrogenase
13_2_20cm_2_scaffold_264_24
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27093..27587)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036F3E60
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24413.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
13_2_20cm_2_scaffold_264_25
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27535..28668)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036FF717
Amidohydrolase 2 {ECO:0000313|EMBL:EWM11439.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
amidohydrolase
13_2_20cm_2_scaffold_264_26
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28674..29048)
DNA (375bp) protein (125aa)
monooxygenase n=1 Tax=Actinoplanes globisporus RepID=UPI0003745FF5
Monooxygenase {ECO:0000313|EMBL:KDN22287.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
monooxygenase component MmoB/DmpM
13_2_20cm_2_scaffold_264_27
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29045..30214)
DNA (1170bp) protein (390aa)
toluene hydroxylase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026280C2
methane/phenol/toluene hydroxylase
Methane/phenol/toluene hydroxylase {ECO:0000313|EMBL:AIJ24416.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methano
13_2_20cm_2_scaffold_264_28
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30211..31260)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000361ED5B rbh
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF {ECO:0000313|EMBL:EHR50830.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;"
ascD; CDP-6-deoxy-delta-3,4-glucoseen reductase
13_2_20cm_2_scaffold_264_29
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31322..31792)
DNA (471bp) protein (157aa)
methane monooxygenase n=1 Tax=Actinoplanes globisporus RepID=UPI00037EA241
Methane monooxygenase {ECO:0000313|EMBL:EWM11443.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
methane monooxygenase
Displaying 29 items

View Taxonomy