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13_2_20cm_2_scaffold_298

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_298_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1..210
DNA (210bp) protein (70aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] id=14631338 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_2_20cm_2_scaffold_298_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

168..1382
DNA (1215bp) protein (405aa)
Beta-lactamase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC30_GEMAT
beta-lactamase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase
13_2_20cm_2_scaffold_298_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1372..1776
DNA (405bp) protein (135aa)
Uncharacterized protein id=4040228 bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiol-disulfide oxidoreductase DCC Tax=GWA2_Rokubacteria_73_35_curated
putative thiol-disulfide oxidoreductase DCC
13_2_20cm_2_scaffold_298_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1766..2107
DNA (342bp) protein (114aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
protein of unknown function DUF59
13_2_20cm_2_scaffold_298_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2104..3231)
DNA (1128bp) protein (376aa)
putative ribonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
13_2_20cm_2_scaffold_298_6
unknown

Not on your lists

comp(3250..3420)
DNA (171bp) protein (57aa)

This feature has no annotations

13_2_20cm_2_scaffold_298_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3448..4434
DNA (987bp) protein (329aa)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZ17_9EURY
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:ERH09460.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
1-aminocyclopropane-1-carboxylate deaminase
13_2_20cm_2_scaffold_298_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4431..5636
DNA (1206bp) protein (402aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC35_GEMAT
putative hydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
putative hydrolase
13_2_20cm_2_scaffold_298_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5682..5954)
DNA (273bp) protein (91aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin Tax=GWC2_Gemmatimonadetes_71_10_curated
ferredoxin
13_2_20cm_2_scaffold_298_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6045..7088)
DNA (1044bp) protein (348aa)
Zn-dependent protease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLI9_SINAD
Zn-dependent protease
Zn-dependent protease {ECO:0000313|EMBL:AGA30254.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidi
13_2_20cm_2_scaffold_298_11
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7098..7874)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUS7_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07751.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_2_20cm_2_scaffold_298_12
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8141..8494
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI00035D3021
TetR family transcriptional regulator
Putative Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH90491.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modest
13_2_20cm_2_scaffold_298_13
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

8545..9165
DNA (621bp) protein (207aa)
Putative cyclase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI7_KORVE
putative metal-dependent hydrolase Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
cyclase
13_2_20cm_2_scaffold_298_14
unknown

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9185..10588
DNA (1404bp) protein (468aa)

This feature has no annotations

13_2_20cm_2_scaffold_298_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10661..12637)
DNA (1977bp) protein (659aa)
Phosphomethylpyrimidine synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFV4_9BACT
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=GWC2_Gemmatimonadetes_71_10_curated
thiC; thiamine biosynthesis protein thiC
13_2_20cm_2_scaffold_298_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12694..13302
DNA (609bp) protein (203aa)
Molybdenum hydroxylase accessory protein, YgfJ family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KUE8_9FIRM
uncharacterized MobA-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
molybdenum hydroxylase accessory protein, YgfJ family
13_2_20cm_2_scaffold_298_17
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

13437..14102
DNA (666bp) protein (222aa)
Putative transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC41_GEMAT
putative transcriptional regulator Tax=RBG_16_Acidobacteria_68_9_curated
putative transcriptional regulator
13_2_20cm_2_scaffold_298_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14099..15535
DNA (1437bp) protein (479aa)
Fe-S cluster assembly protein SufB n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZX02_MELRP
Fe-S cluster assembly protein SufB Tax=RBG_16_Gemmatimonadetes_66_8_curated
Fe-S cluster assembly protein SufB
13_2_20cm_2_scaffold_298_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15532..16293
DNA (762bp) protein (254aa)
Iron-regulated ABC transporter ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FeS assembly ATPase SufC
FeS assembly ATPase SufC id=2754156 bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_2_20cm_2_scaffold_298_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16290..17597
DNA (1308bp) protein (436aa)
Iron-regulated ABC transporter permease protein SufD Tax=GWC2_Gemmatimonadetes_71_10_curated
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=14430756 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
sufD; FeS assembly protein SufD
13_2_20cm_2_scaffold_298_21
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17597..18826
DNA (1230bp) protein (410aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1590652 species="Bacteria; Firmic
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037CFF17
SufS family cysteine desulfurase
13_2_20cm_2_scaffold_298_22
Halobacillus sp. BBL2006, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18807..19250
DNA (444bp) protein (148aa)
NifU family iron-sulfur cluster assembly protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JQ50_HALH3
nifU; NifU family iron-sulfur cluster assembly protein
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KHE72034.1}; TaxID=1543706 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BBL2006.;"
13_2_20cm_2_scaffold_298_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19310..20272
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDA7F
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC transporter related protein
13_2_20cm_2_scaffold_298_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20265..21530
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344BF53
hypothetical membrane protein; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_2_20cm_2_scaffold_298_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21649..22026
DNA (378bp) protein (126aa)
S23 ribosomal protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S23 ribosomal protein id=7201927 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
S23 ribosomal protein
13_2_20cm_2_scaffold_298_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22153..23958
DNA (1806bp) protein (602aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J5_GEMAT
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
13_2_20cm_2_scaffold_298_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24093..24926
DNA (834bp) protein (278aa)
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PI99_9DELT
parA; chromosome partitioning protein ParA; K03496 chromosome partitioning protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cobyrinic acid ac-diamide synthase
13_2_20cm_2_scaffold_298_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24923..25813
DNA (891bp) protein (297aa)
Chromosome partitioning protein ParB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
parB-like partition protein
13_2_20cm_2_scaffold_298_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25810..26598
DNA (789bp) protein (263aa)
Peptidase M23 n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A5U9_THEAQ
Cell wall endopeptidase, family M23/M37 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metalloendopeptidase-like membrane protein
13_2_20cm_2_scaffold_298_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26600..27010
DNA (411bp) protein (137aa)
Cell shape determination protein CcmA n=1 Tax=uncultured bacterium RepID=K1YVZ2_9BACT
Integral membrane protein CcmA involved in cell shape determination Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Integral membrane protein CcmA involved in cell shape determination
Displaying items 1-30 of 46 in total

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