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13_2_20cm_2_scaffold_3046

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3046_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2..493
DNA (492bp) protein (164aa)
ABC transporter permease n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037E6AEC
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
binding-protein-dependent transport systems inner membrane component
13_2_20cm_2_scaffold_3046_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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483..1142
DNA (660bp) protein (220aa)
ABC transporter n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036E833E
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC transporter-like protein
13_2_20cm_2_scaffold_3046_3
Vibrio vulnificus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1183..1428
DNA (246bp) protein (82aa)
Phosphoenolpyruvate-protein kinase n=2 Tax=Vibrio mimicus RepID=U5A9R3_VIBMI
Phosphoenolpyruvate protein kinase {ECO:0000313|EMBL:KFK56960.1}; TaxID=672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio vulnificus.;"
phosphoenolpyruvate-protein kinase
13_2_20cm_2_scaffold_3046_4
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1524..1910
DNA (387bp) protein (129aa)
DGPFAETKE family protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MCL0_9BURK
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:AET91827.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
13_2_20cm_2_scaffold_3046_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1974..2756)
DNA (783bp) protein (261aa)
Tax=GWE1_Thiobacillus_62_9_curated
13_2_20cm_2_scaffold_3046_6
RLO_PLX_64_10, Bacteria

Not on your lists

3026..3322
DNA (297bp) protein (99aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein id=14428964 bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_3046_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

3384..3728
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECP7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82459.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_2_20cm_2_scaffold_3046_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3744..5021
DNA (1278bp) protein (426aa)
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase subunit sigma-24
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AGP32752.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sor
13_2_20cm_2_scaffold_3046_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5021..5389
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A3308
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABF41720.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
13_2_20cm_2_scaffold_3046_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5402..6250
DNA (849bp) protein (283aa)
UPI0003CFE58C related cluster n=1 Tax=unknown RepID=UPI0003CFE58C
5'-3' exonuclease {ECO:0000313|EMBL:ESZ21479.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C0
5'-3' exonuclease
13_2_20cm_2_scaffold_3046_11
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6247..6660
DNA (414bp) protein (138aa)
DoxX family protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULK1_ANASK
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ACG72859.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sourc
13_2_20cm_2_scaffold_3046_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6641..8050
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=uncultured bacterium 66 RepID=E3T665_9BACT
MatE family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MATE efflux family protein
13_2_20cm_2_scaffold_3046_13
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8181..9749
DNA (1569bp) protein (523aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T982_NIAKG
radical SAM protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
Elongator protein 3/MiaB/NifB
13_2_20cm_2_scaffold_3046_trna_4
unknown

Not on your lists

comp(9815..9896)
DNA (82bp)
transferRNA
13_2_20cm_2_scaffold_3046_14
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

10033..11097
DNA (1065bp) protein (355aa)
Histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1II26_9CHLR
Histidine kinase {ECO:0000313|EMBL:EFO79144.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochlori
histidine kinase
13_2_20cm_2_scaffold_3046_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11170..12243)
DNA (1074bp) protein (358aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FBA3_SORC5
13_2_20cm_2_scaffold_3046_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12346..13872
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003662449 rbh
Histidine kinase {ECO:0000313|EMBL:AKD58532.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
chemotaxis protein CheY
13_2_20cm_2_scaffold_3046_trna_3
unknown

Not on your lists

comp(13981..14053)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_3046_trna_2
unknown

Not on your lists

comp(14207..14278)
DNA (72bp)
transferRNA
13_2_20cm_2_scaffold_3046_trna_1
unknown

Not on your lists

comp(14351..14423)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_3046_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

14633..15709
DNA (1077bp) protein (359aa)
diguanylate cyclase id=14431325 bin=bin3_NC10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase Tax=CSP1_5_NC10
Conserved protein of unknown function (membrane protein with a C-terminal Diguanylate cyclase domain)
13_2_20cm_2_scaffold_3046_18
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15844..17760
DNA (1917bp) protein (639aa)
PAS/PAC sensor hybrid histidine kinase id=14623097 bin=bin5_DeltaP species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
PAS/PAC sensor hybrid histidine kinase Tax=CSP1_8_Deltaproteobacteria
PAS/PAC sensor hybrid histidine kinase
13_2_20cm_2_scaffold_3046_19
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17880..18548
DNA (669bp) protein (223aa)
Fumarate and nitrate reduction regulatory protein n=2 Tax=Alcaligenes RepID=M5J3D4_9BURK
crp-like helix-turn-helix domain protein
Transcriptional regulator {ECO:0000313|EMBL:ERI33940.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EG
13_2_20cm_2_scaffold_3046_20
unknown

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18545..18874
DNA (330bp) protein (110aa)

This feature has no annotations

13_2_20cm_2_scaffold_3046_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18982..19515
DNA (534bp) protein (178aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88836.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 25 items

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