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13_2_20cm_2_scaffold_3138

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3138_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..548
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_2 repeat-containing protein
13_2_20cm_2_scaffold_3138_2
unknown

Not on your lists

578..1237
DNA (660bp) protein (220aa)

This feature has no annotations

13_2_20cm_2_scaffold_3138_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1234..3066
DNA (1833bp) protein (611aa)
fadD; Long-chain acyl-CoA synthetase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
AMP-dependent synthetase and ligase
fadD; Long-chain acyl-CoA synthetase id=16791950 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM rbh
13_2_20cm_2_scaffold_3138_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3063..3692)
DNA (630bp) protein (210aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_3138_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3692..4399)
DNA (708bp) protein (236aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G3_GEMAT
putative oxidoreductase Tax=GWC2_Gemmatimonadetes_71_10_curated
short-chain dehydrogenase/reductase SDR
13_2_20cm_2_scaffold_3138_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4396..4992)
DNA (597bp) protein (199aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G2_GEMAT
GTP cyclohydrolase 1
13_2_20cm_2_scaffold_3138_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5006..6226
DNA (1221bp) protein (407aa)
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sodium/calcium exchanger membrane region; K07301 inner membrane protein id=14425893 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
sodium/calcium exchanger membrane region
13_2_20cm_2_scaffold_3138_8
unknown

Not on your lists

6442..6603
DNA (162bp) protein (54aa)

This feature has no annotations

13_2_20cm_2_scaffold_3138_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6600..7265)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F9_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GCN5-related N-acetyltransferase
13_2_20cm_2_scaffold_3138_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7220..7423)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GCN5-related N-acetyltransferase
13_2_20cm_2_scaffold_3138_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7404..9833)
DNA (2430bp) protein (810aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F7_GEMAT
SMC domain protein
SMC domain protein {ECO:0000313|EMBL:AHG90234.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_3138_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9830..11038)
DNA (1209bp) protein (403aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F6_GEMAT
exonuclease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Calcineurin-like phosphoesterase superfamily domain protein
13_2_20cm_2_scaffold_3138_13
unknown

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comp(11035..11898)
DNA (864bp) protein (288aa)

This feature has no annotations

13_2_20cm_2_scaffold_3138_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11900..13846)
DNA (1947bp) protein (649aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
rxy:Rxyl_0452 hypothetical protein id=18022 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
13_2_20cm_2_scaffold_3138_15
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13843..14838)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SMX6_9CYAN
hypothetical protein Tax=RBG_16_Armatimonadetes_58_9_curated
hypothetical protein
13_2_20cm_2_scaffold_3138_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14926..15327)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003652FD5
O-methyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
O-methyltransferase
13_2_20cm_2_scaffold_3138_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15327..15842)
DNA (516bp) protein (172aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_3138_18
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

16286..17011
DNA (726bp) protein (242aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] id=24400542 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
peptidase M24
13_2_20cm_2_scaffold_3138_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17008..18195)
DNA (1188bp) protein (396aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F2_GEMAT
13_2_20cm_2_scaffold_3138_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18278..19495
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F1_GEMAT
DbpA RNA-binding domain protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_3138_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19500..19793)
DNA (294bp) protein (98aa)
DNA-binding protein HU n=3 Tax=Anaerostipes RepID=B0MEU3_9FIRM
hup; DNA-binding protein Hup Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
histone family protein DNA-binding protein
13_2_20cm_2_scaffold_3138_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19849..20457
DNA (609bp) protein (203aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=861299 species="Bacteria; Gemmat
Thymidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F0_GEMAT
Thymidine kinase
13_2_20cm_2_scaffold_3138_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20473..21456
DNA (984bp) protein (328aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dephospho-CoA kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E7_GEMAT
Dephospho-CoA kinase
13_2_20cm_2_scaffold_3138_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21468..21857
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E6_GEMAT
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gcvH; glycine cleavage system H protein
13_2_20cm_2_scaffold_3138_25
unknown

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comp(21890..22138)
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_2_scaffold_3138_26
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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22210..22416
DNA (207bp) protein (69aa)
UPF0173 metal-dependent hydrolase PYCH_05180 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHS5_PYRYC
metal-dependent hydrolase
UPF0173 metal-dependent hydrolase PYCH_05180 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyroco
13_2_20cm_2_scaffold_3138_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

22487..25306
DNA (2820bp) protein (940aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GJB5_9CYAN
Glycine dehydrogenase [decarboxylating]
13_2_20cm_2_scaffold_3138_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25359..25994
DNA (636bp) protein (212aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Octanoyltransferase LipM id=3877510 bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_3138_29
unknown

Not on your lists

25996..26244
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 29 items

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