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13_2_20cm_2_scaffold_3175

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3175_1
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(183..1181)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037DB3C2
Mg2+/Co2+ transporter
Mg2+/Co2+ transporter {ECO:0000313|EMBL:AGB20707.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
13_2_20cm_2_scaffold_3175_2
Halomonas titanicae, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1534..2277
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B48A77
Aldolase-type TIM barrel {ECO:0000313|EMBL:ELY21846.1}; TaxID=1204738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas titanica
hypothetical protein
13_2_20cm_2_scaffold_3175_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2262..3149)
DNA (888bp) protein (296aa)
dehydrogenase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3DEA6
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDM65851.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes
NAD-dependent epimerase/dehydratase
13_2_20cm_2_scaffold_3175_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3238..3768
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000363537A
Uncharacterized protein {ECO:0000313|EMBL:ESW88998.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Hypothetical protein
13_2_20cm_2_scaffold_3175_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3779..4618)
DNA (840bp) protein (280aa)
Putative arylesterase-like protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9S6_FRASU
arylesterase-like protein
Putative arylesterase-like protein {ECO:0000313|EMBL:ADP84579.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_2_20cm_2_scaffold_3175_6
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4796..5224
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037D5393
Protease {ECO:0000313|EMBL:AKB26044.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
PKD domain-containing protein
13_2_20cm_2_scaffold_3175_7
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5285..6790)
DNA (1506bp) protein (502aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) RepID=H2K4M7_STRHJ
ABC transporter ATP-binding protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus sub
13_2_20cm_2_scaffold_3175_8
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6759..6959)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003639597
antibiotic resistance aBC transporter aTP-binding protein
Antibiotic resistance ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:AEF41511.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
13_2_20cm_2_scaffold_3175_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7049..7543
DNA (495bp) protein (165aa)
Thioesterase superfamily protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5L4_SPHTD
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
thioesterase superfamily protein
13_2_20cm_2_scaffold_3175_10
unknown

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7584..7766
DNA (183bp) protein (61aa)

This feature has no annotations

13_2_20cm_2_scaffold_3175_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7789..8520)
DNA (732bp) protein (244aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3J5_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB52360.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
13_2_20cm_2_scaffold_3175_12
unknown

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8543..8857
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_2_scaffold_3175_13
unknown

Not on your lists

comp(8903..9112)
DNA (210bp) protein (70aa)

This feature has no annotations

13_2_20cm_2_scaffold_3175_14
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9156..9596)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PGC8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC66660.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
peptidase
13_2_20cm_2_scaffold_3175_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9593..10867)
DNA (1275bp) protein (425aa)
Monooxygenase, FAD-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARX4_RUBXD rbh
monooxygenase
Monooxygenase, FAD-binding protein {ECO:0000313|EMBL:ABG05854.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sou
13_2_20cm_2_scaffold_3175_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10925..12244)
DNA (1320bp) protein (440aa)
Multidrug resistance protein B n=1 Tax=Mycobacterium sp. 012931 RepID=S7R9B9_9MYCO rbh
Putative conserved two-domain membrane protein {ECO:0000313|EMBL:EHN11903.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;"
Putative transmembrane transport protein
13_2_20cm_2_scaffold_3175_17
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12325..13941)
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000376C4D2 rbh
putative dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGL15826.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
13_2_20cm_2_scaffold_3175_18
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13946..15319)
DNA (1374bp) protein (458aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; TaxID=483547 species="Bacteria; Proteobacteria; Deltapr
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037D8839 rbh
13_2_20cm_2_scaffold_3175_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15560..17419
DNA (1860bp) protein (620aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEJ9_CONWI
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADB49673.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Con
13_2_20cm_2_scaffold_3175_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17451..18617)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000368CE36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26971.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
13_2_20cm_2_scaffold_3175_21
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18834..19379
DNA (546bp) protein (182aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WRX8_ALIAD
hemerythrin hhE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ACV59389.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclob
13_2_20cm_2_scaffold_3175_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19402..21453)
DNA (2052bp) protein (684aa)
hydrolase (EC:3.-.-.-)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E5B9_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHN11126.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
13_2_20cm_2_scaffold_3175_23
unknown

Not on your lists

comp(21690..21788)
DNA (99bp) protein (33aa)

This feature has no annotations

13_2_20cm_2_scaffold_3175_24
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22307..23425
DNA (1119bp) protein (373aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromono
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W0M8_9ACTO
ATP-dependent metalloprotease FtsH
13_2_20cm_2_scaffold_3175_25
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23773..25554
DNA (1782bp) protein (594aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RBG_13_Deltaproteobacteria_65_10_curated
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) id=4341672 bin=GWC2_Nitrospirae_57_13 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
diguanylate cyclase/phosphodiesterase
13_2_20cm_2_scaffold_3175_26
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25551..27656
DNA (2106bp) protein (702aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
Multi-sensor hybrid histidine kinase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBD0_9PLAN
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EDL58025.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia mari
13_2_20cm_2_scaffold_3175_27
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

27719..29734
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000345E3D1
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Hypothetical protein
13_2_20cm_2_scaffold_3175_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

29731..30120
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT2_CONWI
response regulator receiver protein
DNA-binding response regulator Tax=RBG_16_Nitrospirae_64_22_curated
13_2_20cm_2_scaffold_3175_29
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30164..30553
DNA (390bp) protein (130aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AST2_RUBXD
two component LuxR family transcriptional regulator
Response regulator {ECO:0000313|EMBL:KFF47717.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
13_2_20cm_2_scaffold_3175_30
unknown

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30865..31146
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 30 items

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