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13_2_20cm_2_scaffold_331

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_331_1
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..479)
DNA (477bp) protein (159aa)
major facilitator transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B5B0B8
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AJD44964.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
13_2_20cm_2_scaffold_331_2
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(600..1055)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ46_PSEUX
ycdZ; inner membrane protein ycdZ
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_2_20cm_2_scaffold_331_3
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

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1424..2173
DNA (750bp) protein (250aa)
HemK family modification methylase (EC:2.1.1.72)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00036CD083
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
13_2_20cm_2_scaffold_331_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2164..2805)
DNA (642bp) protein (214aa)
Putative two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B7_CALAS
two component LuxR family transcriptional regulator Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component response regulator
13_2_20cm_2_scaffold_331_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2814..3497)
DNA (684bp) protein (228aa)
Histidine kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYD5_ROSS1
histidine kinase Tax=RBG_16_Chloroflexi_63_12_curated
histidine kinase
13_2_20cm_2_scaffold_331_6
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3515..3982)
DNA (468bp) protein (156aa)
membrane protein n=1 Tax=Escherichia coli RepID=UPI00037B70C6
membrane protein
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_2_20cm_2_scaffold_331_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3995..5908)
DNA (1914bp) protein (638aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glucosamine-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate deaminase-like protein
13_2_20cm_2_scaffold_331_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6043..7347)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37785.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_2_scaffold_331_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7529..8680
DNA (1152bp) protein (384aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U4C9_DEIML
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
PAS/PAC sensor signal transduction histidine kinase
13_2_20cm_2_scaffold_331_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8743..10281
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFAC0
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M28
13_2_20cm_2_scaffold_331_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10291..10764)
DNA (474bp) protein (158aa)
Glyoxalase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBI4_9RHIZ
glyoxalase/bleomycin resistance protein/dioxygenase; K07104 Tax=RBG_16_Gemmatimonadetes_66_8_curated
glyoxalase
13_2_20cm_2_scaffold_331_12
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10856..12484
DNA (1629bp) protein (543aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI13_RHOM4
delta-1-pyrroline-5-carboxylate dehydrogenase
Tax=BJP_IG2157_Desulfuromonadales_56_134
13_2_20cm_2_scaffold_331_13
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

12481..13077
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
hypothetical protein
13_2_20cm_2_scaffold_331_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13156..13332)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XPD1_9BACT id=73381 bin=ACD51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_331_15
unknown

Not on your lists

13738..14253
DNA (516bp) protein (172aa)

This feature has no annotations

13_2_20cm_2_scaffold_331_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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14298..15827
DNA (1530bp) protein (510aa)
hypothetical protein; K06888 Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein; K06888 id=24560588 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
N-acylglucosamine 2-epimerase
13_2_20cm_2_scaffold_331_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15896..16444
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_331_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16441..17055
DNA (615bp) protein (205aa)
putative glycosyl hydrolase, family 13 (EC:2.4.1.-)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
glycoside hydrolase family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_331_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17052..17717
DNA (666bp) protein (222aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_331_20
unknown

Not on your lists

17836..18042
DNA (207bp) protein (69aa)

This feature has no annotations

13_2_20cm_2_scaffold_331_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18050..18586)
DNA (537bp) protein (179aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Displaying 21 items

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