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13_2_20cm_2_scaffold_3712

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3712_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1525
DNA (1524bp) protein (508aa)
AMP-binding domain protein n=2 Tax=Burkholderia pseudomallei RepID=B2HCC4_BURPE
Putative AMP-dependent synthetase and ligase, exosortase system type 1 associated {ECO:0000313|EMBL:CDH43680.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteracea
AMP-binding enzyme family protein
13_2_20cm_2_scaffold_3712_2
unknown

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comp(1563..2573)
DNA (1011bp) protein (337aa)

This feature has no annotations

13_2_20cm_2_scaffold_3712_3

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2694..3659
DNA (966bp) protein (322aa)
Conserved domain protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AD81_CARHZ
Marine sediment metagenome DNA, contig: S01H1_L03993 {ECO:0000313|EMBL:GAF79155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_2_20cm_2_scaffold_3712_4
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3674..5515)
DNA (1842bp) protein (614aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBT4_CHLAD
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACL24901.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source=
13_2_20cm_2_scaffold_3712_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5702..7105)
DNA (1404bp) protein (468aa)
MATE efflux family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UN55_MYXSD
multidrug transporter MatE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
MATE efflux family protein
13_2_20cm_2_scaffold_3712_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7102..7494)
DNA (393bp) protein (131aa)
Response regulator receiver protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D048_9BACT id=126151 bin=ACD79 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
response regulator receiver protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator receiver protein
13_2_20cm_2_scaffold_3712_7
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(7518..10478)
DNA (2961bp) protein (987aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FJD5_DESAA rbh
PAS domain S-box Tax=RBG_13_Chloroflexi_66_10_curated
PAS sensor protein
13_2_20cm_2_scaffold_3712_8
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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10708..11133
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VK31_METM7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR66807.1}; TaxID=426368 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis
13_2_20cm_2_scaffold_3712_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11093..11653)
DNA (561bp) protein (187aa)
ssuE; NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein (EC:1.5.1.29)
NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein {ECO:0000313|EMBL:CBJ51395.1}; EC=1.5.1.29 {ECO:0000313|EMBL:CBJ51395.1};; TaxID=305 species="Bacteria; Proteobacteria; Betaproteoba
NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein n=1 Tax=blood disease bacterium R229 RepID=G2ZTH6_9RALS
13_2_20cm_2_scaffold_3712_10
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

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11731..12402
DNA (672bp) protein (224aa)
hypothetical protein Tax=RBG_16_Chloroflexi_48_7_curated
Putative uncharacterized protein id=4651293 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_2_20cm_2_scaffold_3712_11
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12280..12819)
DNA (540bp) protein (180aa)
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:ETK20699.1}; TaxID=1284393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
histidine kinase
response regulator receiver protein id=15193919 bin=GWC2_NOV_55_46 species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
13_2_20cm_2_scaffold_3712_12
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12900..14162)
DNA (1263bp) protein (421aa)
Extracellular repeat protein, HAF family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M895_GEODF
extracellular repeat-containing protein, HAF family
HAF repeat protein {ECO:0000313|EMBL:ACM20361.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (stra
13_2_20cm_2_scaffold_3712_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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14560..15207
DNA (648bp) protein (216aa)
Abortive infection protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DRT4_9EURY
abortive infection protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Abortive infection protein
13_2_20cm_2_scaffold_3712_trna_1
unknown

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comp(15288..15361)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_3712_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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15549..17015
DNA (1467bp) protein (489aa)
Putative amino acid ABC transporter permease/substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL6_GEMAT
putative amino acid ABC transporter permease/substrate binding protein; K02029 polar amino acid transport system permease protein; K02030 polar amino acid transport system substrate-binding protein Ta
putative amino acid ABC transporter permease/substrate binding protein
13_2_20cm_2_scaffold_3712_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17221..17643
DNA (423bp) protein (141aa)
Putative amino acid ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL7_GEMAT
amino acid ABC transporter ATP-binding protein
Putative amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH40244.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Ge
13_2_20cm_2_scaffold_3712_16
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(17653..17901)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SLK6_PLABD
unclassified
Uncharacterized protein {ECO:0000313|EMBL:ADY57689.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasi
13_2_20cm_2_scaffold_3712_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(17942..18211)
DNA (270bp) protein (90aa)
GTP-binding protein TypA n=4 Tax=Bacteria RepID=C1A9K9_GEMAT
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:AHG91278.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_3712_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(18169..19662)
DNA (1494bp) protein (498aa)
GTP-binding protein TypA n=4 Tax=Bacteria RepID=C1A9K9_GEMAT
typA; GTP-binding protein TypA; K06207 GTP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GTP-binding protein TypA
13_2_20cm_2_scaffold_3712_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(19773..20195)
DNA (423bp) protein (141aa)
Cation diffusion facilitator family transporter n=1 Tax=Brevibacillus sp. BC25 RepID=J2GSL4_9BACL
zinc transporter ZitB; K03295 cation efflux system protein, CDF family Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
Displaying 20 items

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