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13_2_20cm_2_scaffold_3774

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3774_1
unknown

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3..83
DNA (81bp) protein (27aa)

This feature has no annotations

13_2_20cm_2_scaffold_3774_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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80..1639
DNA (1560bp) protein (520aa)
lnt-1; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Apolipoprotein N-acyltransferase n=2 Tax=Geobacter metallireducens RepID=LNT_GEOMG
lnt; apolipoprotein N-acyltransferase
13_2_20cm_2_scaffold_3774_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1820..3796
DNA (1977bp) protein (659aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AXZ6_FRADG
13_2_20cm_2_scaffold_3774_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3793..5358
DNA (1566bp) protein (522aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Hydantoin utilization protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L3_GEMAT
Hydantoinase B/oxoprolinase
13_2_20cm_2_scaffold_3774_5
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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5355..5711
DNA (357bp) protein (119aa)
Gll2265 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIB8_GLOVI
hypothetical protein
Gll2265 protein {ECO:0000313|EMBL:BAC90206.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_2_scaffold_3774_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5708..7525)
DNA (1818bp) protein (606aa)
metal dependent phosphohydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
Metal dependent phosphohydrolase id=4372559 bin=GWA2_Planctomycetia_40_7 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
metal dependent phosphohydrolase
13_2_20cm_2_scaffold_3774_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7564..8274)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Curli production assembly/transport component CsgG
13_2_20cm_2_scaffold_3774_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8291..9172)
DNA (882bp) protein (294aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Metallo-beta-lactamase family protein id=2777649 bin=GWC2_Chloroflexi_73_18 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
beta-lactamase superfamily metal-dependent hydrolase
13_2_20cm_2_scaffold_3774_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(9265..9936)
DNA (672bp) protein (224aa)
Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L5_GEMAT
Crp family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
Crp family transcriptional regulator
13_2_20cm_2_scaffold_3774_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10101..10313
DNA (213bp) protein (71aa)
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L31 id=3650204 bin=GWA2_Ignavibacteriae_54_16_partial species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
rpmE; 50S ribosomal protein L31
13_2_20cm_2_scaffold_3774_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10421..11257
DNA (837bp) protein (279aa)
Peptide chain release factor 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L6_GEMAT
Peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
13_2_20cm_2_scaffold_3774_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11250..12158
DNA (909bp) protein (303aa)
putative methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L7_GEMAT
protein-(glutamine-N5) methyltransferase, release factor-specific
13_2_20cm_2_scaffold_3774_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12155..12508
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF964
13_2_20cm_2_scaffold_3774_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12508..13137
DNA (630bp) protein (210aa)
tmk; dTMP kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STM7_9BACT
13_2_20cm_2_scaffold_3774_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13134..14753
DNA (1620bp) protein (540aa)
ctpA; carboxyl-terminal processing protease precursor (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carboxyl-terminal processing protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M0_GEMAT
carboxyl-terminal protease
13_2_20cm_2_scaffold_3774_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14755..15663
DNA (909bp) protein (303aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQA9_ROSCS
NADP oxidoreductase coenzyme F420-dependent Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADP oxidoreductase coenzyme F420-dependent
13_2_20cm_2_scaffold_3774_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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15755..16567
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PDV0_9CYAN id=5225296 bin=16ft_combo_ws3_JS1 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_2_20cm_2_scaffold_3774_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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16564..16782
DNA (219bp) protein (73aa)
ptsN; PTS family fructose/mannitol (fru) porter component IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] id=24490873 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ptsN; PTS family fructose/mannitol (fru) porter component IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RBG_16_RIF_WS3X_71_46_curated
putative PTS IIA-like nitrogen-regulatory protein PtsN
13_2_20cm_2_scaffold_3774_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(16810..17316)
DNA (507bp) protein (169aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M2_GEMAT
lolA; outer-membrane lipoprotein carrier protein precursor; K03634 outer membrane lipoprotein carrier protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lolA; outer-membrane lipoprotein carrier protein precursor
13_2_20cm_2_scaffold_3774_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(17441..18481)
DNA (1041bp) protein (347aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M3_GEMAT
phospho-2-dehydro-3-deoxyheptonate aldolase
13_2_20cm_2_scaffold_3774_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(18484..19251)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_3774_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(19252..19746)
DNA (495bp) protein (165aa)
Chromosome partition protein Smc n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M6_GEMAT
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 22 items

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