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13_2_20cm_2_scaffold_4098

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_4098_1
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(155..367)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:CCH78077.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
13_2_20cm_2_scaffold_4098_2
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(364..723)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00035E9FB4
Transcriptional regulator, PadR family protein {ECO:0000313|EMBL:CCH78076.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera j
PadR family transcriptional regulator
13_2_20cm_2_scaffold_4098_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(758..991)
DNA (234bp) protein (78aa)
LysR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_2_scaffold_4098_4
unknown

Not on your lists

1138..1578
DNA (441bp) protein (147aa)

This feature has no annotations

13_2_20cm_2_scaffold_4098_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1587..2618
DNA (1032bp) protein (344aa)
hypothetical protein GobsU_12882 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4DDE id=5223865 bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
multidrug transporter
13_2_20cm_2_scaffold_4098_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2651..3154
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E7_CONWI
hypothetical protein; K07040 uncharacterized protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_2_20cm_2_scaffold_4098_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3132..3371)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382FC91
Uncharacterized protein {ECO:0000313|EMBL:EWC59945.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongi
hypothetical protein
13_2_20cm_2_scaffold_4098_8
unknown

Not on your lists

comp(3567..3806)
DNA (240bp) protein (80aa)

This feature has no annotations

13_2_20cm_2_scaffold_4098_9
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

4035..5006
DNA (972bp) protein (324aa)
plsX; glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Acidobacteria_64_8_curated
Phosphate acyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDG9_THET1
fatty acid/phospholipid synthesis protein PlsX
13_2_20cm_2_scaffold_4098_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5046..5291
DNA (246bp) protein (82aa)
acyl carrier protein n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C669
acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acyl carrier protein
13_2_20cm_2_scaffold_4098_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5495..5974
DNA (480bp) protein (160aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RBG_16_Actinobacteria_68_12_curated
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E3_CONWI
13_2_20cm_2_scaffold_4098_12
unknown

Not on your lists

6002..6175
DNA (174bp) protein (58aa)

This feature has no annotations

13_2_20cm_2_scaffold_4098_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6429..8753
DNA (2325bp) protein (775aa)
Chromosome partition protein Smc n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E2_CONWI
SMC domain-containing protein; K03529 chromosome segregation protein Tax=RBG_16_Actinobacteria_68_12_curated
SMC domain-containing protein
13_2_20cm_2_scaffold_4098_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8763..9887
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN33_9DELT
lanthionine synthetase C-like family protein Tax=RBG_16_Actinobacteria_68_12_curated
lanthionine synthetase C-like protein
13_2_20cm_2_scaffold_4098_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9911..11092
DNA (1182bp) protein (394aa)
ampS; aminopeptidase (EC:3.4.11.-) Tax=RBG_16_Actinobacteria_68_12_curated
ampS; aminopeptidase (EC:3.4.11.-)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000376AD20
13_2_20cm_2_scaffold_4098_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11089..12273
DNA (1185bp) protein (395aa)
ampS; aminopeptidase (EC:3.4.11.-) Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI000376AD20
peptidase M29 aminopeptidase II
13_2_20cm_2_scaffold_4098_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12394..13305
DNA (912bp) protein (304aa)
Signal recognition particle receptor FtsY n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E0_CONWI
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RBG_16_Actinobacteria_68_12_curated
signal recognition particle-docking protein FtsY
13_2_20cm_2_scaffold_4098_18
unknown

Not on your lists

comp(13235..13867)
DNA (633bp) protein (211aa)

This feature has no annotations

13_2_20cm_2_scaffold_4098_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


14107..15051
DNA (945bp) protein (315aa)
Signal recognition particle protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPQ7_9FIRM
ffh; signal recognition particle protein fifty-four homolog; K03106 signal recognition particle subunit SRP54 Tax=RBG_16_Actinobacteria_68_12_curated
signal recognition particle subunit FFH/SRP54 (srp54)
13_2_20cm_2_scaffold_4098_20
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15374..16009
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Virgibacillus sp. CM-4 RepID=T0JHV7_9BACI
Phosphodiesterase {ECO:0000313|EMBL:CDQ40021.1}; TaxID=1462526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. Vm-5.;"
Calcineurin-like phosphoesterase superfamily domain protein
13_2_20cm_2_scaffold_4098_21
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15999..16472
DNA (474bp) protein (158aa)
Ribosome maturation factor RimM n=2 Tax=Acidiphilium RepID=RIMM_ACICJ
ribosome maturation factor rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacterace
13_2_20cm_2_scaffold_4098_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16479..17120
DNA (642bp) protein (214aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D3_CONWI
13_2_20cm_2_scaffold_4098_23
unknown

Not on your lists

17117..17308
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 23 items

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