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13_2_20cm_2_scaffold_401

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_401_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3..497)
DNA (495bp) protein (165aa)
Putative transcriptional regulator n=1 Tax=Halogranum salarium B-1 RepID=J3JDG8_9EURY
putative transcriptional regulator, TrmB Tax=RBG_16_Euryarchaeota_67_27_curated
transcriptional regulator, TrmB
13_2_20cm_2_scaffold_401_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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631..2223
DNA (1593bp) protein (531aa)
FAD/FMN-containing dehydrogenase, putative glycolate oxidase, fused subunits GlcD and GlcF n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGF7_9BACT
FAD/fMN-containing dehydrogenase subunit GlcDF; K06911 Tax=RBG_16_Euryarchaeota_67_27_curated
FAD/fMN-containing dehydrogenase subunit GlcDF
13_2_20cm_2_scaffold_401_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2396..3061
DNA (666bp) protein (222aa)
NADH dehydrogenase subunit B (EC:1.6.99.5) Tax=RBG_16_Euryarchaeota_68_13_curated
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH dehydrogenase subunit B n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T3Z2_9EURY
13_2_20cm_2_scaffold_401_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3036..3875
DNA (840bp) protein (280aa)
NADH dehydrogenase subunit I (EC:1.6.99.5) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
NADH dehydrogenase subunit I (EC:1.6.99.5)
NADH dehydrogenase subunit I n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7I6_9EURY
13_2_20cm_2_scaffold_401_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3975..4952
DNA (978bp) protein (326aa)
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-) id=14626473 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-)
13_2_20cm_2_scaffold_401_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4949..5920
DNA (972bp) protein (324aa)
methionine synthase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methionine synthase (EC:2.1.1.14)
methionine synthase n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B60FA4
13_2_20cm_2_scaffold_401_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5970..6431
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1AEN6_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_2_scaffold_401_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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6471..6776
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TN95_METAC
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_2_scaffold_401_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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6790..7392
DNA (603bp) protein (201aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_401_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7464..8573
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B4A51
CoB--CoM heterodisulfide reductase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CoB--CoM heterodisulfide reductase
13_2_20cm_2_scaffold_401_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(8589..9083)
DNA (495bp) protein (165aa)
iron-sulfur binding protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036AD119
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
iron-sulfur cluster assembly accessory protein
13_2_20cm_2_scaffold_401_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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9113..10564
DNA (1452bp) protein (484aa)
Ycf24 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKV6_GLOVI
cysteine desulfurase; K09014 Fe-S cluster assembly protein SufB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ycf24; cysteine desulfurase
13_2_20cm_2_scaffold_401_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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10594..11364
DNA (771bp) protein (257aa)
FeS assembly ATPase SufC (EC:3.6.3.27); K09013 Fe-S cluster assembly ATP-binding protein id=14632747 bin=bin9_gal15 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
sufC; FeS assembly ATPase SufC Tax=RBG_16_Euryarchaeota_68_12_curated
sufC; SufC, related to ABC transporter associated with Fe-S cluster assembly (ATP-binding protein)
13_2_20cm_2_scaffold_401_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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11309..12718
DNA (1410bp) protein (470aa)
iron ABC transporter permease; K09015 Fe-S cluster assembly protein SufD Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=14425452 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
FeS assembly protein SufD
13_2_20cm_2_scaffold_401_15
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

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12771..13223
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4E6FF
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
iscU; SUF system FeS assembly protein, NifU family
13_2_20cm_2_scaffold_401_16
AR10, Diapherotrites, DPANN, Archaea

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13226..14551
DNA (1326bp) protein (442aa)
Fe-S cluster assembly protein SufB
Iron-regulated ABC transporter membrane component SufB; K09014 Fe-S cluster assembly protein SufB id=5241319 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Iron-regulated ABC transporter membrane component SufB; K09014 Fe-S cluster assembly protein SufB Tax=AR10
13_2_20cm_2_scaffold_401_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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14625..15872
DNA (1248bp) protein (416aa)
cysteine desulfurase SufS; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037CFF17
SufS subfamily cysteine desulfurase
13_2_20cm_2_scaffold_401_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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15872..16264
DNA (393bp) protein (131aa)
SUF system FeS cluster assembly protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE34_NITGG
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_16_Euryarchaeota_68_13_curated
nifU; SUF system FeS cluster assembly protein
13_2_20cm_2_scaffold_401_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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16279..17208
DNA (930bp) protein (310aa)
cysteine synthase-like protein; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RBG_16_Euryarchaeota_68_13_curated
cysteine synthase (EC:2.5.1.47) id=12556071 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cysteine synthase (EC:2.5.1.47)
13_2_20cm_2_scaffold_401_20
unknown

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17398..17556
DNA (159bp) protein (53aa)

This feature has no annotations

13_2_20cm_2_scaffold_401_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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17682..18383
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037B5012
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
molybdopterin and thiamine biosynthesis family dinucleotide-utilizing protein
Displaying 21 items

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