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13_2_20cm_2_scaffold_4244

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_4244_1
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1..1242)
DNA (1242bp) protein (414aa)
N-methylhydantoinase B (EC:3.5.2.14)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035EC520
Uncharacterized protein {ECO:0000313|EMBL:EQB65606.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
13_2_20cm_2_scaffold_4244_2
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1358..2251)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00037B5856
UbiE/COQ5 family methlytransferase
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:CAM06276.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora
13_2_20cm_2_scaffold_4244_3
unknown

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2478..2675
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_2_scaffold_4244_4
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2727..4769)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MWA1_9EURY rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB65605.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
5-oxoprolinase
13_2_20cm_2_scaffold_4244_5

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5024..5206
DNA (183bp) protein (61aa)
Marine sediment metagenome DNA, contig: S01H4_S19451 {ECO:0000313|EMBL:GAH06156.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_2_20cm_2_scaffold_4244_6
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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5305..5862
DNA (558bp) protein (186aa)
hypothetical protein Tax=RBG_16_Zixibacteria_50_21_curated
Putative uncharacterized protein id=3730355 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
13_2_20cm_2_scaffold_4244_7
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5912..6268)
DNA (357bp) protein (119aa)
Transcriptional regulator, HxlR family n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GG12_METPE
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACL16086.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="
13_2_20cm_2_scaffold_4244_8
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6396..6803
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268EE
Uncharacterized protein {ECO:0000313|EMBL:EIF89888.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488
13_2_20cm_2_scaffold_4244_9
Streptomyces lavendulae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7039..8238)
DNA (1200bp) protein (400aa)
tetrahydromethanopterin S-methyltransferase subunit A (EC:2.1.1.86)
MmcE n=1 Tax=Streptomyces lavendulae RepID=Q9X5S3_STRLA
MmcE {ECO:0000313|EMBL:AAD32728.1}; TaxID=1914 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lavendulae.;"
13_2_20cm_2_scaffold_4244_10
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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8604..8858
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MU86_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB66821.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-pl
13_2_20cm_2_scaffold_4244_11
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8881..9471)
DNA (591bp) protein (197aa)
Isochorismatase hydrolase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTC5_9DELT
Isochorismatase hydrolase {ECO:0000313|EMBL:EPX59908.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
isochorismatase hydrolase
13_2_20cm_2_scaffold_4244_12
unknown

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9673..10065
DNA (393bp) protein (131aa)

This feature has no annotations

13_2_20cm_2_scaffold_4244_13
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10103..11002)
DNA (900bp) protein (300aa)
Haloalkane dehalogenase n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H6V4_9ACTO
Haloalkane dehalogenase {ECO:0000313|EMBL:GAB11579.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
putative hydrolase or acyltransferase
13_2_20cm_2_scaffold_4244_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(11011..11529)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQS6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH85797.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_2_20cm_2_scaffold_4244_15
unknown

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11530..11742
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_2_scaffold_4244_16
unknown

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comp(11661..12128)
DNA (468bp) protein (156aa)

This feature has no annotations

13_2_20cm_2_scaffold_4244_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12230..13117
DNA (888bp) protein (296aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2T4_NITMS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF84062.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Ni
13_2_20cm_2_scaffold_4244_18
unknown

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comp(13248..13499)
DNA (252bp) protein (84aa)

This feature has no annotations

13_2_20cm_2_scaffold_4244_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(13502..14641)
DNA (1140bp) protein (380aa)
nitrogenase subunit NifH (ATPase)-like protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Putative uncharacterized protein id=2456014 bin=GWF1_Spirochaetes_51_8 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
hypothetical protein
13_2_20cm_2_scaffold_4244_20
RBG_16_Archaea_50_20_curated, Archaea

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14798..15319
DNA (522bp) protein (174aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RBG_16_Archaea_50_20_curated
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I id=3678561 bin=GWC2_Nitrospirae-rel_56_14 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
13_2_20cm_2_scaffold_4244_21
unknown

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comp(16041..16277)
DNA (237bp) protein (79aa)

This feature has no annotations

13_2_20cm_2_scaffold_4244_22
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(16522..17007)
DNA (486bp) protein (162aa)
Site-specific recombinase XerD n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH5_9ARCH
Site-specific recombinase XerD {ECO:0000313|EMBL:EMR73901.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
Displaying 22 items

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