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13_2_20cm_2_scaffold_4374

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_4374_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..755)
DNA (753bp) protein (251aa)
ring-opening amidohydrolase (EC:3.5.2.15)
Ring-opening amidohydrolase {ECO:0000313|EMBL:ADP81157.1}; EC=3.5.2.15 {ECO:0000313|EMBL:ADP81157.1};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frank
Ring-opening amidohydrolase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JD18_FRASU
13_2_20cm_2_scaffold_4374_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(752..2035)
DNA (1284bp) protein (428aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:ACM04861.1}; EC=6.3.5.- {ECO:0000313|EMBL:ACM04861.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiace
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXI6_THERP
13_2_20cm_2_scaffold_4374_3
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2032..2727)
DNA (696bp) protein (232aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:KJF17108.1}; EC=3.2.2.9 {ECO:0000313|EMBL:KJF17108.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Ac
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003705CFC
putative MTA/SAH nucleosidase
13_2_20cm_2_scaffold_4374_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

2752..5145
DNA (2394bp) protein (798aa)
phosphoketolase (EC:4.1.2.22); K01632 fructose-6-phosphate phosphoketolase [EC:4.1.2.22] Tax=GWC2_RIF_CHLX_73_18_curated
Probable phosphoketolase id=4176196 bin=GWC2_Chloroflexi_73_18 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
phosphoketolase
13_2_20cm_2_scaffold_4374_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5150..6262
DNA (1113bp) protein (371aa)
ackA; acetate kinase A (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1] Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003697CBA rbh
acetate kinase
13_2_20cm_2_scaffold_4374_6
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6259..6486)
DNA (228bp) protein (76aa)
Thioredoxin 2 n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z025_STRSW
trxC; thioredoxin 2
Thioredoxin 2 {ECO:0000313|EMBL:CBG75411.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomy
13_2_20cm_2_scaffold_4374_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6743..7174)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000366070E
UPF0145 protein NMD1_02844 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
hypothetical protein
13_2_20cm_2_scaffold_4374_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7180..7515)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C73E7F
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_2_20cm_2_scaffold_4374_9
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7572..8009
DNA (438bp) protein (146aa)
peroxiredoxin n=1 Tax=Streptomyces purpureus RepID=UPI000365A2CA
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AJF67860.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
13_2_20cm_2_scaffold_4374_10
unknown

Not on your lists

comp(8006..8533)
DNA (528bp) protein (176aa)

This feature has no annotations

13_2_20cm_2_scaffold_4374_11
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

8664..9176
DNA (513bp) protein (171aa)
msrA; peptide-methionine (S)-S-oxide reductase (EC:1.8.4.11) Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R0V3_METFO
methionine-S-sulfoxide reductase
13_2_20cm_2_scaffold_4374_12
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9230..10384
DNA (1155bp) protein (385aa)
Putative DNA-binding protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRP4_MICPN
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:BAK37107.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovoru
13_2_20cm_2_scaffold_4374_13
unknown

Not on your lists

10385..11269
DNA (885bp) protein (295aa)

This feature has no annotations

13_2_20cm_2_scaffold_4374_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11308..12426
DNA (1119bp) protein (373aa)
Integral membrane protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCZ3_9DELT
MMPL domain protein; K06994 putative drug exporter of the RND superfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
MMPL domain protein
13_2_20cm_2_scaffold_4374_15
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

12399..13040
DNA (642bp) protein (214aa)
MMPL domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHF8_THET1
MMPL domain protein
MMPL domain protein {ECO:0000313|EMBL:ACZ43179.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_2_20cm_2_scaffold_4374_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13092..13460
DNA (369bp) protein (123aa)
MMPL domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHF8_THET1
MMPL domain protein; K06994 putative drug exporter of the RND superfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
MMPL domain protein
13_2_20cm_2_scaffold_4374_17
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13638..14462
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000367355B
Uncharacterized protein {ECO:0000313|EMBL:CCH80435.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
13_2_20cm_2_scaffold_4374_18
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14459..15874)
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acid
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUW0_ACIC1 rbh
periplasmic sensor signal transduction histidine kinase
13_2_20cm_2_scaffold_4374_19
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15871..16563)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUW1_ACIC1
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABK53221.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Aci
13_2_20cm_2_scaffold_4374_20
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16600..17424)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003706826
ApbE-like thiamine biosynthesis lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:ERI38004.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
13_2_20cm_2_scaffold_4374_21
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17421..17618)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00036DAE45
Uncharacterized protein {ECO:0000313|EMBL:GAM46268.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
ferredoxin
13_2_20cm_2_scaffold_4374_22
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17636..18310)
DNA (675bp) protein (225aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5) Tax=RBG_16_RIF_CHLX_72_14_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037DABF9
Displaying 22 items

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