ggKbase home page

13_2_20cm_2_scaffold_4795

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_4795_1

Not on your lists

comp(1..357)
DNA (357bp) protein (119aa)
UDP-glucose 6-dehydrogenase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1APZ3_9ZZZZ
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EQD44110.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
algD; GDP-mannose 6-dehydrogenase
13_2_20cm_2_scaffold_4795_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(347..1552)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F32C9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_2_20cm_2_scaffold_4795_3
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1549..3315)
DNA (1767bp) protein (589aa)
Asparagine synthase {ECO:0000313|EMBL:ELQ86429.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ELQ86429.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" sou
asnB-1; asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8F547_MYCSM
13_2_20cm_2_scaffold_4795_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3326..5476)
DNA (2151bp) protein (717aa)
Heparinase II/III family protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXD7_9BACT
heparinase II/III family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
heparinase II/III family protein
13_2_20cm_2_scaffold_4795_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5473..6531)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CA46F
Glycosyltransferase {ECO:0000313|EMBL:CDM66251.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycosyl transferase, group 1
13_2_20cm_2_scaffold_4795_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(6539..6814)
DNA (276bp) protein (92aa)
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_2_20cm_2_scaffold_4795_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6829..7995)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RTZ1_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_2_20cm_2_scaffold_4795_8
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7955..8914)
DNA (960bp) protein (320aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHT3_ANASK
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
polysaccharide deacetylase
13_2_20cm_2_scaffold_4795_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(8904..10151)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0B1_CORCM
cellulose biosynthesis protein CelD Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_2_scaffold_4795_10
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10130..10597)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003757D0A
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_2_20cm_2_scaffold_4795_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10567..11085)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFD2_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE99764.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" so
13_2_20cm_2_scaffold_4795_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11148..11444)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003609E30
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
13_2_20cm_2_scaffold_4795_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11563..12459)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGK9_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42396.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_2_20cm_2_scaffold_4795_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12456..14099)
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037F5B8D
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
AMP-dependent synthetase and ligase
13_2_20cm_2_scaffold_4795_15
RLO_PLX_64_10, Bacteria

Not on your lists

comp(14093..15109)
DNA (1017bp) protein (339aa)
putative alkanesulfonate monooxygenase (EC:1.14.14.5); K04091 alkanesulfonate monooxygenase [EC:1.14.14.5] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
putative alkanesulfonate monooxygenase (EC:1.14.14.5)
Putative Alkanesulfonate monooxygenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGL2_9BACT
13_2_20cm_2_scaffold_4795_16
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(15114..15800)
DNA (687bp) protein (229aa)
Bacterial Ig-like domain (group 1) {ECO:0000313|EMBL:AKG91052.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari
13_2_20cm_2_scaffold_4795_17
GWB1_WWE3_41_6, WWE3, Bacteria

Not on your lists

comp(15808..16473)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2V1_MAGSA
Methyltransferase domain protein {ECO:0000313|EMBL:KKS17429.1}; TaxID=1619112 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB1_41_6.;"
hypothetical protein
13_2_20cm_2_scaffold_4795_18
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16470..19355)
DNA (2886bp) protein (962aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000363D449
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ32227.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33
13_2_20cm_2_scaffold_4795_19
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19412..20599)
DNA (1188bp) protein (396aa)
hypothetical protein id=3889570 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Bdellovibrionales_49_15_curated
13_2_20cm_2_scaffold_4795_20
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(20608..21996)
DNA (1389bp) protein (463aa)
Membrane bound O-acyl transferase MBOAT family protein id=3889652 bin=GWA2__Bacteriovorax-rel_49_15 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
membrane bound O-acyl transferase MBOAT family protein Tax=GWA2_Bdellovibrionales_49_15_curated
membrane bound O-acyl transferase MBOAT family protein
13_2_20cm_2_scaffold_4795_21
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(22104..22511)
DNA (408bp) protein (136aa)
Mo-co oxidoreductase dimerization domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
Displaying 21 items

View Taxonomy