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13_2_20cm_2_scaffold_5038

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_5038_1

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2..475
DNA (474bp) protein (158aa)
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RV25_9CLOT
Marine sediment metagenome DNA, contig: S01H4_L03855 {ECO:0000313|EMBL:GAG78602.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dppB; Dipeptide transport system permease protein DppB
13_2_20cm_2_scaffold_5038_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

485..937
DNA (453bp) protein (151aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
Binding-protein-dependent transport systems inner membrane component id=3741106 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
13_2_20cm_2_scaffold_5038_3
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1011..1268
DNA (258bp) protein (86aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWC2_Deltaproteobacteria_65_14_curated
Putative dipeptide ABC transporter id=4708083 bin=GWC2_Proteo_65_14_Ab886 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
oligopeptide transport system permease protein
13_2_20cm_2_scaffold_5038_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

1265..2266
DNA (1002bp) protein (334aa)
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0D6_THERP
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
oligopeptide ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_5038_5
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

2247..3245
DNA (999bp) protein (333aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B62B96
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACZ41735.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_2_20cm_2_scaffold_5038_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

3242..4198
DNA (957bp) protein (319aa)
hypothetical protein id=14630957 bin=bin9_gal15 species=Smaragdicoccus niigatensis genus=Smaragdicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein Tax=CSP1_3_Armatimonadetes
13_2_20cm_2_scaffold_5038_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4226..4909
DNA (684bp) protein (228aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Ince
Endonuclease III n=2 Tax=Sulfobacillus acidophilus RepID=F8I9L3_SULAT
13_2_20cm_2_scaffold_5038_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4925..5704)
DNA (780bp) protein (260aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Frankia sp. CN3 RepID=G6H5K1_9ACTO
27 kDa antigen Cfp30B {ECO:0000313|EMBL:CCH15424.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac
glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_2_scaffold_5038_9

Not on your lists

comp(5868..6395)
DNA (528bp) protein (176aa)
DNA-3-methyladenine glycosylase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF405
Uncharacterized protein {ECO:0000313|EMBL:KKL87344.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_2_20cm_2_scaffold_5038_10

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comp(6426..6881)
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN10447.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_2_scaffold_5038_11
unknown

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comp(6878..7018)
DNA (141bp) protein (47aa)

This feature has no annotations

13_2_20cm_2_scaffold_5038_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7032..7760)
DNA (729bp) protein (243aa)
Uncharacterized protein id=4110406 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein; K06911 Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_2_20cm_2_scaffold_5038_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

7830..8159
DNA (330bp) protein (110aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
13_2_20cm_2_scaffold_5038_14

Not on your lists

8254..8940
DNA (687bp) protein (229aa)
Methyltransferase type 12 n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A907_THECD
Uncharacterized protein {ECO:0000313|EMBL:KGA15706.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
type 12 methyltransferase
13_2_20cm_2_scaffold_5038_15
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9013..9390
DNA (378bp) protein (126aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PXH6_KRIFD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB29824.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella
13_2_20cm_2_scaffold_5038_16
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9469..9819
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003070B6D
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABG63583.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Che
13_2_20cm_2_scaffold_5038_17
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

9803..10291
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000363A934
hypothetical protein Tax=RBG_13_Chloroflexi_60_13_curated
ATPase
13_2_20cm_2_scaffold_5038_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

10296..10697
DNA (402bp) protein (134aa)
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Archaea_50_20_curated
glyoxalase/bleomycin resistance protein/dioxygenase id=24524929 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rhizobium tropici genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
glyoxalase/bleomycin resistance protein/dioxygenase
13_2_20cm_2_scaffold_5038_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10694..11020)
DNA (327bp) protein (109aa)
Putative uncharacterized protein id=3964613 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_2_20cm_2_scaffold_5038_20
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11064..11522
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXJ8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:GAM47800.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
13_2_20cm_2_scaffold_5038_21
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11543..12163)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBI0_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57907.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
13_2_20cm_2_scaffold_5038_22
unknown

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comp(12375..12770)
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_2_scaffold_5038_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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12871..13818
DNA (948bp) protein (316aa)
cyclase; K05555 cyclase [EC:4.-.-.-] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Beta-lactamase domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PY59_CATAD
beta-lactamase domain-containing protein
13_2_20cm_2_scaffold_5038_24
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13884..14642)
DNA (759bp) protein (253aa)
Transcriptional regulator n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HH71_STRPR
Transcriptional regulator {ECO:0000313|EMBL:EDY66182.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATC
TetR family transcriptional regulator
13_2_20cm_2_scaffold_5038_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14741..15778
DNA (1038bp) protein (346aa)
Oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT2_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA46683.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.
oxidoreductase
13_2_20cm_2_scaffold_5038_26
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16035..16682
DNA (648bp) protein (216aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DAB2_9BACL
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EMT50247.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibac
2-dehydro-3-deoxyphosphogluconate aldolase
13_2_20cm_2_scaffold_5038_27
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

16795..17619
DNA (825bp) protein (275aa)
IclR family transcriptional regulator Tax=RBG_16_Chloroflexi_64_32_curated
IclR family transcriptional regulator id=1245514 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
IclR family transcriptional regulator
13_2_20cm_2_scaffold_5038_28
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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17697..18371
DNA (675bp) protein (225aa)
sugar ABC transporter periplasmic ligand binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_16_Gammaproteobacteria_66_13_curated
sugar ABC transporter periplasmic ligand binding protein; K02027 multiple sugar transport system substrate-binding protein id=14632383 bin=bin9_gal15 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
bacterial extracellular solute-binding family protein
Displaying 28 items

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