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13_2_20cm_2_scaffold_5084

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_5084_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..391
DNA (390bp) protein (130aa)
membrane protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036692FD
Membrane protein {ECO:0000313|EMBL:KJC59767.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM
hypothetical protein
13_2_20cm_2_scaffold_5084_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(434..1936)
DNA (1503bp) protein (501aa)
exopolyphosphatase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003608FA8 rbh
Exopolyphosphatase {ECO:0000313|EMBL:KJC59766.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTS
exopolyphosphatase
13_2_20cm_2_scaffold_5084_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1949..4147)
DNA (2199bp) protein (733aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E29DC4 rbh
13_2_20cm_2_scaffold_5084_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4287..4964)
DNA (678bp) protein (226aa)
Bll4123 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MR9_BRADU
hypothetical protein
Bll4123 protein {ECO:0000313|EMBL:BAC49388.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
13_2_20cm_2_scaffold_5084_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4999..5655)
DNA (657bp) protein (219aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX65_RHOP2 rbh
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KJC50931.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
CDP-alcohol phosphatidyltransferase
13_2_20cm_2_scaffold_5084_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5702..6775
DNA (1074bp) protein (358aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHU9_BRAJP rbh
phosphoribosylformylglycinamidine cyclo-ligase
13_2_20cm_2_scaffold_5084_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6844..7485
DNA (642bp) protein (214aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLI1_NITHX rbh
phosphoribosylglycinamide formyltransferase
13_2_20cm_2_scaffold_5084_8
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7487..8437
DNA (951bp) protein (317aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
2-dehydropantoate 2-reductase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8INB6_METNO rbh
13_2_20cm_2_scaffold_5084_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8503..8706)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLI0_NITHX
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABE62917.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitroba
13_2_20cm_2_scaffold_5084_10
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9027..10214
DNA (1188bp) protein (396aa)
Putative autotransporter protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WBD0_9BRAD rbh
Putative autotransporter protein {ECO:0000313|EMBL:EJN16037.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
hypothetical protein
13_2_20cm_2_scaffold_5084_11
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10257..11300)
DNA (1044bp) protein (348aa)
Putative transcriptional regulatory protein, LysR family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S1N5_9BRAD rbh
Putative transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:CCD88112.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizob
LysR family transcriptional regulator
13_2_20cm_2_scaffold_5084_12
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11352..11978
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZA27_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM90126.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
13_2_20cm_2_scaffold_5084_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11965..12588
DNA (624bp) protein (208aa)
Blr4132 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MR0_BRADU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ69677.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
13_2_20cm_2_scaffold_5084_14
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12614..13165
DNA (552bp) protein (184aa)
Blr4133 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MQ9_BRADU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE06975.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
13_2_20cm_2_scaffold_5084_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13180..14328)
DNA (1149bp) protein (383aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=316056 species="Bacteria; Proteobacteria; Alph
Ribonuclease D n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215P9_RHOPB rbh
ribonuclease D
13_2_20cm_2_scaffold_5084_16
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14733..16265)
DNA (1533bp) protein (511aa)
UPF0061 protein C207_05549 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HA17_9BRAD
UPF0061 protein C207_05549 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
hypothetical protein
13_2_20cm_2_scaffold_5084_17
unknown

Not on your lists

comp(16304..16414)
DNA (111bp) protein (37aa)

This feature has no annotations

13_2_20cm_2_scaffold_5084_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16446..17033
DNA (588bp) protein (196aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=SYD_RHOPB
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KIZ42741.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
13_2_20cm_2_scaffold_5084_19
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17023..18207
DNA (1185bp) protein (395aa)
Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) {ECO:0000313|EMBL:CCD94113.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CCD94113.1};; EC=6.1.1.22 {ECO:0000313|E
Aspartate--tRNA ligase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SIT6_9BRAD rbh
aspS; aspartyl-tRNA synthetase
13_2_20cm_2_scaffold_5084_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18262..20475
DNA (2214bp) protein (738aa)
NAD-dependent malic enzyme MaeA n=3 Tax=Oligotropha carboxidovorans RepID=F8BLP2_OLICM
maeA; NAD-dependent malic enzyme MaeA
NAD-dependent malic enzyme MaeA {ECO:0000313|EMBL:AEI06420.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha c
13_2_20cm_2_scaffold_5084_21
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20623..21075
DNA (453bp) protein (151aa)
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037B2B3D
Membrane protein {ECO:0000313|EMBL:KJC55270.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP8
hypothetical protein
13_2_20cm_2_scaffold_5084_22
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21100..21657)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036E1629
Dihydrofolate reductase {ECO:0000313|EMBL:KJC35339.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
13_2_20cm_2_scaffold_5084_23
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21673..22656)
DNA (984bp) protein (328aa)
Polysaccharide deacetylase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWT9_9BRAD rbh
Putative oligosaccharide deacetylase {ECO:0000313|EMBL:KGJ69695.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
polysaccharide deacetylase
13_2_20cm_2_scaffold_5084_24
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22781..23356)
DNA (576bp) protein (192aa)
Glutathione peroxidase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GVF1_9BRAD rbh
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
putative glutathione peroxidase
13_2_20cm_2_scaffold_5084_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23429..23995)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDK6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39646.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
Displaying 25 items

View Taxonomy